Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq13 159 5e-34 seq497 105 9e-18 >seq13 Length=329804 Score = 159 bits (176), Expect = 5e-34 Identities = 481/733 (66%), Gaps = 10/733 (1%) Strand=Plus/Minus Query 69508 TATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACAC 69567 || ||| ||| |||||||| || | |||||| | | ||||| || |||||||| ||| Sbjct 256223 TAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTCATTTGGGCAC 256164 Query 69568 ATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGA 69627 || | | ||| | | ||| | || || ||||| || ||||| |||||||| || Sbjct 256163 ATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTGGAATCCAGAGG 256104 Query 69628 GCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGA 69687 || ||||| || | || | |||||| ||||| || || ||||| || Sbjct 256103 GCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACGGAGATCCAGG 256044 Query 69688 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTA 69747 || ||| || ||| | ||||||||| || |||||||| || | | | || || ||||| Sbjct 256043 AAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACCTGGGCGTTTG 255984 Query 69748 TTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATA 69807 || || || || || | || ||||||||||| || | || | ||||| || | | | Sbjct 255983 TTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCATGGGCACCAGA 255924 Query 69808 CCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATA 69867 ||||| || | || || || || ||| || || |||| | ||| | Sbjct 255923 CCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGATACGGTGGGCA 255864 Query 69868 GATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATA 69926 ||||| ||||| || || | || ||||| | |||| |||| |||| |||||| || Sbjct 255863 TTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCAC-ACGTCTTCAGTGTGTCGTA 255805 Query 69927 TATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC-ATTTGATGAT 69985 ||||| || ||||| ||||| |||| | | || || || | || | | || | Sbjct 255804 GATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCA-CGAGGCAAGCTGGGCTT 255746 Query 69986 GTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCA 70045 || || || ||| | || | || ||||| ||||| ||||| | || | || | || Sbjct 255745 GTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTGTTGGACATCA 255686 Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGC 70104 ||||| || ||||| || || || ||| | | | ||||| || | || |||||| Sbjct 255685 AGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCG-TGAATACCCACAGCAACACGC 255627 Query 70105 ATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTT 70164 || | ||| ||||| || ||||| | || || || || ||||| || | Sbjct 255626 ATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGATACGCAGGAGGTAGGACCTC 255567 Query 70165 TCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAG 70222 ||||| || ||||| || || || | ||| ||||| || | ||||| | |||| | | Sbjct 255566 TCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACAATAGCTG 255509 Query 70223 AATTTAGTTTATC 70235 |||| || | ||| Sbjct 255508 AATTGAGCTCATC 255496 >seq497 Length=111328 Score = 105 bits (116), Expect = 9e-18 Identities = 363/563 (64%), Gaps = 16/563 (3%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | ||||||||| | || | ||||| || || ||||| Sbjct 104765 GCAGGCGAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAG 104824 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || | ||| || |||||||| |||||||| || |||| ||||| || ||||| ||||| Sbjct 104825 ACCTGCCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAATGAACCAGAGAAGAA 104884 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792 ||| || || || || || || |||| ||| || || | | | | || | Sbjct 104885 GATACCCTCAACGGCGGCGAAAGCAATAAGCCTGCAGGCGAATGTGCTGTTCTTGTCGCT 104944 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| || ||||| ||||| ||||| | ||||| || | || || || || Sbjct 104945 GATCCACCTCAAAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGTTGTCGATGGCGTT 105004 Query 39853 AAAGAGATA-ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| || | | | | | | || | | || || || || | ||| || Sbjct 105005 GAAGAGGTAGGTCCTCTGCTTGGGT-TCACTGATGTAGGTGTCGATGAGGAGAGAGTATG 105063 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| || |||||||| || ||| ||||| |||||||| || || || || || | | Sbjct 105064 TTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACCTGGCCTCTGGGA 105123 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| || || | || | | || || || || || ||||| || | Sbjct 105124 TCTGCACCTCACCACTGAAACGCTCGACAAGGTTCTCGTTGACGATGCCATCGGAGGCAG 105183 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084 | || || || | || || || ||| | || || |||| | || Sbjct 105184 CGAAGAAGGCGAGAACGTGGGAGATGAAAAAGCGCTCGTC----GTCATTGAGACGCTTG 105239 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||| | | ||| || || | ||| | || || || ||||| || || |||||| Sbjct 105240 TTCCAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCT 105299 Query 40145 GCCTTTTTGTACATGTTCCATAT 40167 ||||| |||||||| | ||| || Sbjct 105300 GCCTTCTTGTACATCTGCCAGAT 105322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904412370040