Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13 291 9e-74 seq497 122 1e-22 seq57 96.9 4e-15 >seq13 Length=329804 Score = 291 bits (322), Expect = 9e-74 Identities = 909/1390 (65%), Gaps = 23/1390 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || | |||||||| || || |||||||| || Sbjct 255610 CCCCAGCACATGATCATGCGTGTTGCTGTGGGTATTCACGGCGAGGACATTGAGAGTGCA 255669 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || ||||||| | | ||| |||| ||||| | ||||||||||| Sbjct 255670 ATTGAGACGTACAACTTGATGTCCAACAAGTAC-TTCACACACGCCTCTCCAACCCTCTT 255728 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || ||||||||| ||| | |||| | || |||||||| |||| | ||||| || Sbjct 255729 CAGTGCTGGTACCCCACAAGCCCAGCTTGCCTCGTGCTTCCTCATCGATATGAAGGATGA 255788 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | |||||||| | || || | | |||||| ||||| ||| ||||| Sbjct 255789 CAGCATTGATGGTATCTACGACACACTGAAGACGTGTGCCATGATCTCCAAGAACGCTGG 255848 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || || | ||| | | ||||| | | || ||| | || || || Sbjct 255849 TGGAATCGGTCTGAATGCCCACCGTATCAGAGCAACTGGCTCCTACATTAGCGGTACCAA 255908 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || ||||| | | || ||||| ||||| || ||| ||| || | ||||| Sbjct 255909 CGGCACCTCCAATGGTCTGGTGCCCATGCTCCGCGTGTTCAACAACACTGCCAGGTATGT 255968 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | |||| ||| | || | || | | || | ||||| ||||||||||| | Sbjct 255969 GGACCAAGGTGGTAA-CAAACGCCCAGGTGCCTTTGCCATATATCTCGAGCCATGGCATG 256027 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 ||||| | ||| ||||| || | ||| ||||| || | || || | || || Sbjct 256028 CGGATGTTTTGGCCTTCCTGGATCTCCGTAAGAACCACGGAAAAGAAGAAGTCCGTGCCC 256087 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | || ||||||| ||| ||||||||||||||||||||||||||| | || | || | | Sbjct 256088 GTGACCTCTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTCCAAGATAACG 256147 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 ||| ||| ||||| | || ||| | || ||||||||| | |||| | || || | Sbjct 256148 GCACCTGGACTCTCATGTGCCCAAATGAGTGCCCTGGTCTCGCTGATGTCTACGGCGATG 256207 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGCCA 104875 | ||||||| |||||| | |||||| || ||||| ||| | | ||| || | Sbjct 256208 AATTTGAAGAGCTTTACGAGAGATACGAGCGTGAGGGTCGCGGCCGC-GAGACCGTTAGA 256266 Query 104876 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935 || | | ||| | || ||||| || | || ||||||||||| | |||| |||| Sbjct 256267 GCCCAAAAGATCTGGTATGCCATTCTAGAGGCCCAGACCGAGACTGGAAACCCATTCATG 256326 Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995 |||||||| ||||| |||| ||||| || |||||||| | || ||| || Sbjct 256327 CTTTACAAGGACGCTGCCAACCGTAAGAGCAACCAAAAGAACCTCGGCACCATCCGCAGC 256386 Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 105055 ||||| ||||| || || ||| | || | || | |||||| || || |||||| Sbjct 256387 TCCAACCTCTGCACCGAGATCATTGAGTACACTGCTCCCGATGAGGTTGCCGTCTGTAAC 256446 Query 105056 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 105115 || || || || || || || | ||||| ||| ||| || |||||| | | Sbjct 256447 CTTGCCTCTATTGCGCTGCCGACCTATGTCGATATCCAGAATGAGCGATTTGACTTCAAG 256506 Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 || ||||||||||| || | || |||| |||| | |||| | ||||| || Sbjct 256507 AAGCTCCACGAAGTAACCCAGGTCGTTACCAGAAACTTGAACAAGATCATTGAGGTCAAC 256566 Query 105176 TTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232 ||||| || |||| ||||| || || | | |||||||| |||||||| Sbjct 256567 AAATACCCTGTACCTGAG---GCTCGCAAGGGCAACTTCCGCCACCGTCCGATTGGTCTT 256623 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGA 105291 ||||| | ||| | || |||| ||| | | || ||| |||| || || || Sbjct 256624 GGTGTCAATGGTTTGGCAGATGCTTTCCTCGCCCTG-CGCATGCCATTCGACTCTCCTGA 256682 Query 105292 AGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGA 105350 ||| | |||| | || || ||||| || || ||||||||| |||| ||| Sbjct 256683 AGCACGCCAGCTCAACATCCAAATCTTCGAGACTATCTACCACGCCGCT-TTGACCGCGT 256741 Query 105351 GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 105410 | || | || || |||||| || || |||| || || || || | || Sbjct 256742 CTAGCGATCTCGCTGAAAAGCTTGGTCCTTACGAGACCTACGAAGGCTCACCTGTCTCGA 256801 Query 105411 AAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGA 105468 | || | |||||||| || ||||||| || | || | || || | || |||| Sbjct 256802 AGGGTGAGCTTCAATACGACATGTGGG-GTGTCACCCCCA-CTGATCTTTGGGATTGGGC 256859 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||| | || | | | ||| | |||||| ||||||| | || ||||| Sbjct 256860 TGCCCTCAAAGCGAAGATTGCGCAAACCGGTGTGCGTAACTCTCTCCTCGTTGCCCCAAT 256919 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||| || || ||| | || ||| |||| || |||||||| ||||| ||||| | Sbjct 256920 GCCAACTGCTTCGACCTCCCAGATCATGGGATTCAACGAATGCTTCGAACCATACACAAG 256979 Query 105589 GAACATCTAT 105598 ||||||||| Sbjct 256980 CAACATCTAT 256989 >seq497 Length=111328 Score = 122 bits (134), Expect = 1e-22 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 |||||||||||||||||||||||||| || | | || | |||||||||||||| || Sbjct 104896 GTTGAGGGTATCTTCTTCTCTGGTTCATTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGC 104837 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||| |||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct 104836 CTCATGGCAGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGG 104787 >seq57 Length=303147 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGAG 9762 |||||||||||||| ||||| | ||| || ||| || ||||| | || |||| | Sbjct 23586 GCATCAATCTCATCGATGAAAATGATACAAGGTGTGTTTTTC-CTCGCATTAGCAAACAA 23528 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 9822 ||| || ||||| | ||| ||||| || ||||||||||| || | | | || || Sbjct 23527 ATCTCGCACACGTGAAGGGCCAACACCGACGAACATCTCCACGAATTCAGATCCAGA-CA 23469 Query 9823 TTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || ||| || || ||||| || ||| | ||| ||||| | ||||||||| | Sbjct 23468 CCGAGAAGAACGGTACCCCTGATTCTCCAGCAGTTGCTTTCGCGAGCAAAGTCTTACCAG 23409 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| || ||| | ||||| |||||||| || ||||||||||| Sbjct 23408 TACCAGGGGGACCGGAGAGGATTGCACCTCGAGGGATCTTGGCGCC 23363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257074421640