Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq246 122 8e-23 >seq246 Length=221927 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || |||||||| || Sbjct 103084 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAGAGCTCA 103025 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| || |||||||| |||||||| || || || || Sbjct 103024 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 102965 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || ||||| ||| | ||| | || || |||||| Sbjct 102964 CAGCGTCTCATTTTCGCAGGCAAGCAGTTGGAGGACGGCAGGACACTGTCAGACTACAAC 102905 Query 27168 ATTCAAAAGGAG 27179 || || |||||| Sbjct 102904 ATCCAGAAGGAG 102893 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || || || |||||||| || Sbjct 103312 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCA 103253 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| || |||||||| |||||||| ||||| || || Sbjct 103252 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATCCCACCAGACCAG 103193 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || || |||| ||| | ||| | || ||||||||| Sbjct 103192 CAGAGATTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCGGATTACAAC 103133 Query 27168 ATTCAAAAGGAG 27179 ||||| |||||| Sbjct 103132 ATTCAGAAGGAG 103121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915621958720