Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq246 86.0 4e-12 >seq246 Length=221927 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| ||||| || ||||| || ||||| || | | Sbjct 103312 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCA 103253 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| || ||||| ||||| | || ||||| || Sbjct 103252 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAAGGCATCCCACCAGACCAG 103193 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || || || ||||| |||| || || | ||||||||| Sbjct 103192 CAGAGATTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCGGATTACAAC 103133 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||| |||| | || | || | || ||||| || || Sbjct 103132 ATTCAGAAGGAGAGCACACTCCACCTTGTCCTCAGATTGCGCGGTGG 103086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007494939588