Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq13 176 6e-39 >seq13 Length=329804 Score = 176 bits (194), Expect = 6e-39 Identities = 1184/1885 (63%), Gaps = 35/1885 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || || || |||| || || | ||||||| || |||||||| || || || | Sbjct 257366 GTGAATTGGATGGGAGCCGAAGCTGCCATTGTACGAAGGTAGTACATGCCGGTCTTCAAG 257307 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| ||| ||||||||||||||| | ||| |||| || || Sbjct 257306 CCGAGCTTCCAGCCGGTGAAATGCATGCTTGTGATCTTGCCCATGGTAGGCTCCTTCATG 257247 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| |||| || || || || |||||||| || | ||||| ||||| | || Sbjct 257246 TGAATGTTCAGGGATTGCGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTGGATG 257187 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | ||||| | ||| ||| | | | |||| ||||||||| | | Sbjct 257186 ATGGTACGCTGGCTGAGCTCCCACACAGTCTTGTACAATGCCTTGAGATCATCTGGGATG 257127 Query 77022 TTTGTATT---TTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | ||| | || |||||||| | || ||| ||||| || | ||| || Sbjct 257126 TTGGGGATGCGTTGGACCGAGCCACCATCAGCGATGATTCGGTTCTTCATGTTGTCACTC 257067 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 ||||| | || | | | | || || || || || | ||| || || || Sbjct 257066 CACAAACCACGTTCGACGAGATCCTTGAGTAGCCAGGGGTTGACAACTTGGAACTCACCC 257007 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | || | || || || || || |||||||| | |||| ||| |||| Sbjct 257006 GCAAGCACACGGCGCGAATAGATGTTGCTTGTGTATGGTTCGAAGCATTCGTTGAATCCC 256947 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | || || | || |||||||||||||| || || || | | | || | | ||| Sbjct 256946 ATGATCTGGGAGGTCGAAGCAGTTGGCATTGGGGCAACGAGGAGAGAGTTACGCACACCG 256887 Query 77259 TGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 || | | | | || |||| || ||||||||||||||| | || ||| | Sbjct 256886 -GTTTGCGCAATCTTCGCTTTGAGGGCAGCCCAATCCCAAAGATCAGTGGGGGTGACACC 256828 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTATATGTTTCATAAG 77376 ||| | |||||||| || || || | || || ||| || | || || || |||| Sbjct 256827 CCACATGTCGTATTGAAGCTCACCCTT-CGAGACAGGTGAGCCTTCGTAGGTCTCGTAAG 256769 Query 77377 GTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 | || ||||||| || || | | ||| ||| || ||| || || || |||| Sbjct 256768 GACCAAGCTTTTCAGCGAGATCGCTAGACGCGGTCAAAGCGGCGTGGTAGATAGTCTCGA 256709 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA- 77495 | || | | ||||| | |||||||| | || || || ||| | | | Sbjct 256708 AGATTTGGATGTTGAGCTGGCGTGCTTCAGGAGAGTCGAATGGC--ATGCGCAGGGCGAG 256651 Query 77496 -AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 || |||||||| || || | || |||| |||||| || | || | ||| | Sbjct 256650 GAAAGCATCTGCCAAACCATTGACACCAAGACCAATCGGACGGTGGCGGAAGTTGCCCTT 256591 Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 ||| || || | ||| || | || | || || || || || | ||||| ||| Sbjct 256590 GCGAGCCTCAGGTACAGGGTATTTGTTGACCTCAATGATCTTGTTCAAGTTTCTGGTAAC 256531 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT-CT--ATAACAA-ACA 77670 || | || || | || || || ||||||| ||| || ||| | | | | Sbjct 256530 GACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGGATATCGACATA 256471 Query 77671 TGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATT---AGCGTTGGCATA 77725 || || || ||||| || || ||||| || || ||||||| ||| || || Sbjct 256470 GGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTG---TA 256414 Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCT 77785 | || |||||||| || || || | ||| ||||| || || | ||||||||| Sbjct 256413 CTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCT 256354 Query 77786 CTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845 ||| ||| | |||||| ||||| || || || | || || || |||| | || Sbjct 256353 CTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTC 256294 Query 77846 GATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTC 77905 | ||| | | ||||| | ||| | | | | || | ||| | || Sbjct 256293 TAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCCTCACGCTC 256234 Query 77906 ATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTC 77965 ||| || ||| |||||||||||| || | |||||| | | |||||||| || Sbjct 256233 GTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTC 256174 Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 |||||||||||| | | |||| || | || | || || ||||| |||||||| || Sbjct 256173 ATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTGG 256114 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| || || || || || |||| | |||||| ||||| ||||| Sbjct 256113 AATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACG 256054 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 ||||| || || ||| || ||| | ||||||||| || |||||||| || | | || Sbjct 256053 GAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACC 255994 Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205 || ||||| ||||| || || || | ||| ||||| ||||| || | || | | ||| Sbjct 255993 TGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCAT 255934 Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265 || | | ||| || || || || || || || ||| || ||| |||| | || Sbjct 255933 GGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGAT 255874 Query 78266 A--TTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TT 78322 | | || | | || ||||| || || |||| || || | || | |||| || Sbjct 255873 ACGGTGGGCATTCAGA--CCGATTCCACCAGCGTTCTTGGAGATCATGGCAC-ACGTCTT 255817 Query 78323 CAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGA 78382 || ||| ||||||||||| || || ||||||||| |||| | | || || || | || Sbjct 255816 CAGTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCA-CGAGG 255758 Query 78383 C-ATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 | | || || || || ||| | || | || ||||| || || || || | | Sbjct 255757 CAAGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACT 255698 Query 78442 TTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTA 78501 | | || | | ||||| || ||||| || || |||||| ||||| || | Sbjct 255697 TGTTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATACCCA 255638 Query 78502 CCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACA 78561 | || |||||||| | ||| ||||| || | |||| | ||| || || || | Sbjct 255637 CAGCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGATACGCAGGA 255578 Query 78562 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTA 78619 ||| || | |||| || |||||||| || || | ||| ||||| || | ||||| Sbjct 255577 GGTAGGACCTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAA--TCACGGTCGTA 255520 Query 78620 AATAATAACAGAATTTAGTTTATCT 78644 | |||| | ||||| || | |||| Sbjct 255519 GACAATAGCTGAATTGAGCTCATCT 255495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664362803040