Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13 174 2e-38 >seq13 Length=329804 Score = 174 bits (192), Expect = 2e-38 Identities = 1175/1876 (63%), Gaps = 31/1876 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| || ||||||| || |||| ||||||| || |||||||| || || || | Sbjct 257366 GTGAATTGGATGGGAGCCGAAGCTGCCATTGTACGAAGGTAGTACATGCCGGTCTTCAAG 257307 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| ||| ||||||||||||||| | ||| | || || || Sbjct 257306 CCGAGCTTCCAGCCGGTGAAATGCATGCTTGTGATCTTGCCCATGGTAGGCTCCTTCATG 257247 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| |||| || || || || |||||||| || | ||||| ||||| | || Sbjct 257246 TGAATGTTCAGGGATTGCGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTGGATG 257187 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 ||||| || | ||||| | ||| ||| | | | |||| ||||||||| | Sbjct 257186 ATGGTACGCTGGCTGAGCTCCCACACAGTCTTGTACAATGCCTTGAGATCATCTGGGATG 257127 Query 75617 TTTGTATT---TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | | ||| | || || ||||||| || ||| ||||| || | ||| || Sbjct 257126 TTGGGGATGCGTTGGACCGAGCCACCATCAGCGATGATTCGGTTCTTCATGTTGTCACTC 257067 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 ||||| | ||| | | | | || || || || |||| ||| || || || Sbjct 257066 CACAAACCACGTTCGACGAGATCCTTGAGTAGCCAGGGGTTGACAACTTGGAACTCACCC 257007 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | | || | || | || || || || || |||||||| | |||| ||| |||| Sbjct 257006 GCAAGCACACGGCGCGAATAGATGTTGCTTGTGTATGGTTCGAAGCATTCGTTGAATCCC 256947 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853 | || || | || |||||||| ||||| || || || | | | || | | ||| Sbjct 256946 ATGATCTGGGAGGTCGAAGCAGTTGGCATTGGGGCAACGAGGAGAGAGTTACGCACACCG 256887 Query 75854 TGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 || | | | | || |||| || ||||||||||||||| | || ||| | Sbjct 256886 -GTTTGCGCAATCTTCGCTTTGAGGGCAGCCCAATCCCAAAGATCAGTGGGGGTGACACC 256828 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTATATGTTTCGTAAG 75971 ||| | |||||||| || || || | || || ||| || | || || ||||||| Sbjct 256827 CCACATGTCGTATTGAAGCTCACCCTT-CGAGACAGGTGAGCCTTCGTAGGTCTCGTAAG 256769 Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGA 76031 || ||||||||| || |||| | ||| || || ||| || || || |||| Sbjct 256768 GACCAAGCTTTTCAGCGAGATCGCTAGACGCGGTCAAAGCGGCGTGGTAGATAGTCTCGA 256709 Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATA- 76090 | || | | || || | | |||||| || || || || ||| | | | Sbjct 256708 AGATTTGGATGTTGAGCTGGCGTGCTTCAGGAGAGTCGAATGGC--ATGCGCAGGGCGAG 256651 Query 76091 -AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 76149 || |||||||| | || | || |||| |||||| || | || | ||| | Sbjct 256650 GAAAGCATCTGCCAAACCATTGACACCAAGACCAATCGGACGGTGGCGGAAGTTGCCCTT 256591 Query 76150 TTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAC 76209 ||| || || | |||||| | || | || || || || || | |||||| ||| Sbjct 256590 GCGAGCCTCAGGTACAGGGTATTTGTTGACCTCAATGATCTTGTTCAAGTTTCTGGTAAC 256531 Query 76210 TACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC-----TATC-ACAAA 76263 || | || || | || || || |||||| ||| |||| ||| | Sbjct 256530 GACCTGGGTTACTTCGTGGAGCTTCTTGAAGTCAAATCGCTCATTCTGGATATCGACATA 256471 Query 76264 CATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATT---AGCATTGGCATA 76320 | || || ||||| || || ||||| ||||| ||||||| |||| || || Sbjct 256470 GGTCGGCAGCGCAATAGAGGCAAGGTTACAGACGGCAACCTCATCGGGAGCAGTG---TA 256414 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 | || ||||| ||||| || || | ||| || || || || | ||||||||| Sbjct 256413 CTCAATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTTTGGTTGCT 256354 Query 76381 CTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTC 76440 ||| ||| | |||||| ||||| | || || ||||||| || |||| | || Sbjct 256353 CTTACGGTTGGCAGCGTCCTTGTAAAGCATGAATGGGTTTCCAGTCTCGGTCTGGGCCTC 256294 Query 76441 GATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTC 76500 | ||| | | ||||| | ||| | | | | || ||| | || Sbjct 256293 TAGAATGGCATACCAGATCTTTTGGGCTCTAACGGTCTCGCGGCCGCGACCCTCACGCTC 256234 Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560 ||| || | | |||||||||||| || | |||||| | | |||||| || || Sbjct 256233 GTATCTCTCGTAAAGCTCTTCAAATTCATCGCCGTAGACATCAGCGAGACCAGGGCACTC 256174 Query 76561 ATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGG 76620 ||| || ||||| | | ||| || | || | || || ||||| |||||||| || Sbjct 256173 ATTTGGGCACATGAGAGTCCAGGTGCCGTTATCTTGGACACGCTTCATGAAGAGATCTGG 256114 Query 76621 TATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT 76680 ||||| || || || || || |||| | |||||| ||||| ||||| Sbjct 256113 AATCCAGAGGGCGTAGAAGAGGTCACGGGCACGGACTTCTTCTTTTCCGTGGTTCTTACG 256054 Query 76681 AAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACC 76740 ||||| ||||| ||| || ||| | ||||||||| || |||||||| || | |||| Sbjct 256053 GAGATCCAGGAAGGCCAAAACATCCGCATGCCATGGCTCGAGATATATGGCAAAGGCACC 255994 Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800 || ||||| ||||| || || || | ||| ||||||||||| || | || | | ||| Sbjct 255993 TGGGCGTTTGTTACCACCTTGGTCCACATACCTGGCAGTGTTGTTGAACACGCGGAGCAT 255934 Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860 || | | || || || || || || || || ||| || ||| ||| | || Sbjct 255933 GGGCACCAGACCATTGGAGGTGCCGTTGGTACCGCTAATGTAGGAGCCAGTTGCTCTGAT 255874 Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCA 76919 | | || || ||||| || || | || ||||| | ||||| ||| |||| Sbjct 255873 ACGGTGGGCATTCAGACCGATTCCACCAGCGTTCTTGGAGATCATGGCACA-CGTCTTCA 255815 Query 76920 ATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC- 76978 |||||| ||||| || || || || |||||| |||| | | || || || | || | Sbjct 255814 GTGTGTCGTAGATACCATCAATGCTGTCATCCTTCATATCGATGAGGAAGCA-CGAGGCA 255756 Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 | || || || || ||| | || | || ||||| || || ||||| | || Sbjct 255755 AGCTGGGCTTGTGGGGTACCAGCACTGAAGAGGGTTGGAGAGGCGTGTGTGAAGTACTTG 255696 Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACA 77098 | || | | ||||| || ||||| | || || ||| ||||| || ||| Sbjct 255695 TTGGACATCAAGTTGTACGTCTCAATTGCACTCTCAATGTCCTCGCCGTGAATACCCACA 255636 Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAG 77158 || |||||||| | ||| ||||| || ||||| | ||| || || || | | Sbjct 255635 GCAACACGCATGATCATGTGCTGGGGACGTTCAGCGACCTTTCCATCGATACGCAGGAGG 255576 Query 77159 TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAA 77216 || || | |||| || |||||||| || || | ||| ||||| || | ||||| | Sbjct 255575 TAGGACCTCTCCAGTGTCTTAAAACCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGA 255518 Query 77217 TAATAACCGAATTTAG 77232 |||| | ||||| || Sbjct 255517 CAATAGCTGAATTGAG 255502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929846131520