Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1237 149 1e-30
>seq1237
Length=76238
Score = 149 bits (164), Expect = 1e-30
Identities = 188/256 (73%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || || || | ||| ||||||||| | |||||| | || |||||
Sbjct 9081 ATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTCCCC-GTCGC 9023
Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| ||||||||||||| || ||| | ||||||||||| ||||| || |||||| |
Sbjct 9022 TCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCT 8963
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || || || || |||| |||||||| | |||||||| | || |||||
Sbjct 8962 GCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGA 8903
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||| ||||| | || ||||| ||||||||||| ||||| || ||||||| ||||
Sbjct 8902 GAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 8843
Query 230625 GCCTGGTGTGATGAAG 230640
| | ||||| ||| ||
Sbjct 8842 GGCGGGTGTCATGGAG 8827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057782513134430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |