Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq95 161 1e-34 >seq95 Length=22970 Score = 161 bits (178), Expect = 1e-34 Identities = 213/293 (73%), Gaps = 8/293 (3%) Strand=Plus/Minus Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949 |||||| || ||||| ||||| |||||||||||| ||||| ||| | | || || Sbjct 9125 GTGGCAAGGTGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGA- 9067 Query 145950 CCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCAC 146006 | | || ||| || || |||| | || | |||| |||| ||||| ||||| Sbjct 9066 --TGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACGTCCGCCAGCTGATCCAC 9009 Query 146007 GCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066 || || |||| ||| || ||| | | |||||||||| | || |||||||||| |||||| Sbjct 9008 ACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTG 8949 Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126 ||| ||||||||||| || ||||| || ||| | |||| || ||| | | | |||| Sbjct 8948 GAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAG 8889 Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAG 146177 ||| || || || ||||| | ||||||||||||||||| ||||| ||||| Sbjct 8888 GAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAG 8836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 |||||| | || | ||| | |||||| | || ||||||| |||||| ||||||||||| Sbjct 9412 GGCTCCCGCTCCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCG 9353 Query 145720 CCCAGGACGTGGATGAA-GTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778 |||| | ||| ||| || ||||| || || | || ||||| | ||||| || Sbjct 9352 CCCATGGTGTGCGTGAGTGTTCCCGGAGTC-AGATCGCAGACATGGGCCAACATGTGCGT 9294 Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 ||||| | ||| || ||||||||||| || |||| |||||||| | || ||||| Sbjct 9293 GAGCAGAGCGTACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTG 9234 Query 145839 GTACAGCTGGCAGGAGAGCTCCCCGC 145864 ||| ||| | ||| ||| | |||| Sbjct 9233 GTAGAGCAGACAGTGCAGCACGCCGC 9208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590054222186440