Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq95 161 1e-34
>seq95
Length=22970
Score = 161 bits (178), Expect = 1e-34
Identities = 213/293 (73%), Gaps = 8/293 (3%)
Strand=Plus/Minus
Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949
|||||| || ||||| ||||| |||||||||||| ||||| ||| | | || ||
Sbjct 9125 GTGGCAAGGTGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGA- 9067
Query 145950 CCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCAC 146006
| | || ||| || || |||| | || | |||| |||| ||||| |||||
Sbjct 9066 --TGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACGTCCGCCAGCTGATCCAC 9009
Query 146007 GCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066
|| || |||| ||| || ||| | | |||||||||| | || |||||||||| ||||||
Sbjct 9008 ACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTG 8949
Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126
||| ||||||||||| || ||||| || ||| | |||| || ||| | | | ||||
Sbjct 8948 GAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAG 8889
Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAG 146177
||| || || || ||||| | ||||||||||||||||| ||||| |||||
Sbjct 8888 GAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAG 8836
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/206 (71%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
|||||| | || | ||| | |||||| | || ||||||| |||||| |||||||||||
Sbjct 9412 GGCTCCCGCTCCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCG 9353
Query 145720 CCCAGGACGTGGATGAA-GTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778
|||| | ||| ||| || ||||| || || | || ||||| | ||||| ||
Sbjct 9352 CCCATGGTGTGCGTGAGTGTTCCCGGAGTC-AGATCGCAGACATGGGCCAACATGTGCGT 9294
Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838
||||| | ||| || ||||||||||| || |||| |||||||| | || |||||
Sbjct 9293 GAGCAGAGCGTACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTG 9234
Query 145839 GTACAGCTGGCAGGAGAGCTCCCCGC 145864
||| ||| | ||| ||| | ||||
Sbjct 9233 GTAGAGCAGACAGTGCAGCACGCCGC 9208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590054222186440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |