Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 125 6e-24
seq2223 125 6e-24
seq1971 125 6e-24
seq1718 125 6e-24
seq819 125 6e-24
seq911 107 2e-18
seq2536 86.0 5e-12
>seq2315
Length=136826
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 44736 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 44795
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 44796 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 92211 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 92152
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 92151 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 92092
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 92091 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 92032
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 92031 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
>seq2223
Length=69470
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 44736 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 44795
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 44796 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
>seq1971
Length=47716
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 27074 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 27015
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 27014 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq1718
Length=45196
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 27074 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 27015
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 27014 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq819
Length=68040
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||||||||| || ||||| ||||| | ||| || | |||||
Sbjct 23425 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 23366
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 23365 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 23306
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 23305 TGAATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 23246
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 23245 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
>seq911
Length=71809
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| || | || |||||||| || ||||| ||||| || || || | |||
Sbjct 44616 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCC 44675
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| |||||||| | || || | |||||||||| ||| | ||| ||||||||
Sbjct 44676 TCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | ||| ||||| | ||| |||| |||||||||
Sbjct 44736 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTC 44795
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||| ||||| || || |||||
Sbjct 44796 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| || | || | || |||||||| || ||||| |||||
Sbjct 45112 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTG 45171
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||| ||||| || |||| || | |||||||||| |||
Sbjct 45172 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 45231
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | | |||
Sbjct 45232 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACC 45291
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| ||||||||||||||
Sbjct 45292 TCGAGGGTGATGGTCTTGCCGGT 45314
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || |||| || | ||| ||||||||||| ||||| || || |
Sbjct 44373 CCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAG 44432
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||| ||||| |||||||| | || || | |||||||||| |||
Sbjct 44433 AGCGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 44492
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | ||| || || | |||
Sbjct 44493 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACC 44552
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||||| |||||||| || | || || || || || |||||
Sbjct 44553 TCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 44599
>seq2536
Length=61238
Score = 86.0 bits (94), Expect = 5e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045
|||| || ||||| ||||| | |||||| || | ||||| ||||| ||||| || |||
Sbjct 20613 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 20554
Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105
| || | |||||||||| ||| | ||| |||||||| ||||| || || | |
Sbjct 20553 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGT 20494
Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165
||| || || | ||| || | ||| ||||||||||| || | || ||||| |
Sbjct 20493 CGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 20434
Query 21166 ATATTTGCAT 21175
| || |||||
Sbjct 20433 AGATCTGCAT 20424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422243447224676
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