Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 102 7e-17
seq2223 102 7e-17
seq1971 102 7e-17
seq1718 102 7e-17
seq819 102 7e-17
>seq2315
Length=136826
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 44676
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 44677 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 44736
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 44737 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 92209 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 92151
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 92150 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 92091
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 92090 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 92033
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 92032 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 44408 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 44467
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 44468 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 44527
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 44528 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 44587
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 44588 GAAGATCTGCAT 44599
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 92419 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 92360
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 92359 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 92300
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 92299 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 92240
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 92239 GAAGATCTGCAT 92228
>seq2223
Length=69470
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 44676
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 44677 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 44736
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 44737 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 44408 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 44467
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 44468 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 44527
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 44528 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 44587
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 44588 GAAGATCTGCAT 44599
>seq1971
Length=47716
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 27134
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 27133 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 27074
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 27073 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 27402 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 27343
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 27342 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 27283
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 27282 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 27223
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 27222 GAAGATCTGCAT 27211
>seq1718
Length=45196
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 27134
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 27133 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 27074
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 27073 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 27402 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 27343
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 27342 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 27283
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 27282 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 27223
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 27222 GAAGATCTGCAT 27211
>seq819
Length=68040
Score = 102 bits (112), Expect = 7e-17
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| || || || ||| |||||| || |||||||| || | || | | || ||||||
Sbjct 23423 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGC-CGTCCT 23365
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||||||||| || || | || | ||||||||| ||| || | | |||||||||
Sbjct 23364 CCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT 23305
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||||| | | || |||||||||| ||||| ||| | ||| |||||
Sbjct 23304 GAATCTTGCTCTTGACGTTGTCG--ATGGTATCGGACGACTCAACCTCCAATGTAATGGT 23247
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || || ||||||||
Sbjct 23246 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||| ||||||||||||| | || | ||||||| ||||||||| || |
Sbjct 23633 CTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAA 23574
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || ||||||||| || ||| ||| |
Sbjct 23573 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTCACGTT 23514
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||| ||| ||||| || || || || || ||||| || || ||
Sbjct 23513 ATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAAC 23454
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 23453 GAAGATCTGCAT 23442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421235484829061
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