Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2315 82.4 7e-11 seq2223 82.4 7e-11 seq1971 82.4 7e-11 seq1718 82.4 7e-11 seq819 82.4 7e-11 >seq2315 Length=136826 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 44448 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 44449 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 44508 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 44509 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 44568 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 44569 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 44601 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 44738 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 44797 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 44798 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 92209 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 92150 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 92149 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 92090 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 92089 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 92030 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 92029 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 92436 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 92379 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 92378 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 92319 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 92318 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 92259 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 92258 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 92226 >seq2223 Length=69470 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 44448 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 44449 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 44508 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 44509 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 44568 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 44569 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 44601 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 44738 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 44797 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 44798 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 >seq1971 Length=47716 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 27072 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 27013 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 27012 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 27419 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 27362 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 27361 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 27302 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 27301 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 27242 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 27241 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 27209 >seq1718 Length=45196 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 27072 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 27013 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 27012 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 27419 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 27362 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 27361 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 27302 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 27301 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 27242 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 27241 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 27209 >seq819 Length=68040 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || ||| || ||||| Sbjct 23423 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 23364 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | ||||| | | ||||| || || || || || || ||||| | Sbjct 23363 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 23304 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||||| | ||| || || | || || || | || ||||| || Sbjct 23303 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 23244 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 23243 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| || |||||||| | ||| ||||| | || || || ||||| Sbjct 23650 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 23593 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 23592 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 23533 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||| ||| ||| ||||| | || || || | ||| || || | Sbjct 23532 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 23473 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | ||||| || || || || ||||||||||||| Sbjct 23472 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 23440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448274047257960