Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 82.4 7e-11
seq2223 82.4 7e-11
seq1971 82.4 7e-11
seq1718 82.4 7e-11
seq819 82.4 7e-11
>seq2315
Length=136826
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 44448
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 44449 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 44508
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 44509 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 44568
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 44569 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 44601
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 44738 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 44797
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 44798 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 92209 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 92150
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 92149 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 92090
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 92089 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 92030
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 92029 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 92436 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 92379
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 92378 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 92319
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 92318 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 92259
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 92258 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 92226
>seq2223
Length=69470
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 44448
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 44449 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 44508
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 44509 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 44568
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 44569 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 44601
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 44738 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 44797
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 44798 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
>seq1971
Length=47716
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 27072 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 27013
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 27012 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 27419 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 27362
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 27361 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 27302
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 27301 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 27242
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 27241 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 27209
>seq1718
Length=45196
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 27072 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 27013
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 27012 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 27419 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 27362
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 27361 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 27302
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 27301 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 27242
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 27241 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 27209
>seq819
Length=68040
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||| || ||| || |||||
Sbjct 23423 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 23364
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 23363 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 23304
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||| | ||| || || | || || || | || ||||| ||
Sbjct 23303 AATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTT 23244
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 23243 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||| || |||||||| | ||| ||||| | || || || |||||
Sbjct 23650 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAG--AGAGCGTGCGACCATCCT 23593
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| || || | ||||| | | ||||| || || || ||||| || ||||| |
Sbjct 23592 CCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCT 23533
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || | ||| ||| ||| ||||| | || || || | ||| || || |
Sbjct 23532 GGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCT 23473
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || || || |||||||||||||
Sbjct 23472 TGCCAGTGAGGGTCTTAACGAAGATCTGCATGC 23440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448274047257960
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