Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1237 104 2e-17 seq2315 89.7 5e-13 seq2223 89.7 5e-13 seq1971 89.7 5e-13 seq1718 89.7 5e-13 seq819 89.7 5e-13 >seq1237 Length=76238 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || |||||||| | || || ||||| | Sbjct 8845 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 8904 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||||| | | | || ||| Sbjct 8905 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAG 8964 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||||||| || | || |||||||| | | || Sbjct 8965 GCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGT-CGCGTTCATGCCAAGAAGAG 9023 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 |||| || | ||| | || | ||| ||||| || || ||||| || || Sbjct 9024 CGACGGGGAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTC 9072 >seq2315 Length=136826 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 44858 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 44857 CTCCACCTCGTCCT 44844 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 91790 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 91849 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 91850 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 91909 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 91910 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 91969 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 91970 CTCCACCTCGTCCT 91983 >seq2223 Length=69470 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 44858 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 44857 CTCCACCTCGTCCT 44844 >seq1971 Length=47716 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 26952 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 26953 CTCCACCTCGTCCT 26966 >seq1718 Length=45196 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 26952 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 26953 CTCCACCTCGTCCT 26966 >seq819 Length=68040 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | ||||| || | |||||| |||| | || || | |||||||||||| | ||| Sbjct 23004 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 23063 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || || || || || || | || |||| || | Sbjct 23064 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 23123 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 ||||| || ||||| |||| | | |||||||||| ||||| || ||||| ||| Sbjct 23124 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 23183 Query 26967 ATCCATCTGGTCCT 26980 |||| || ||||| Sbjct 23184 CTCCACCTCGTCCT 23197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478644085179920