Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1237 104 2e-17
seq2315 89.7 5e-13
seq2223 89.7 5e-13
seq1971 89.7 5e-13
seq1718 89.7 5e-13
seq819 89.7 5e-13
>seq1237
Length=76238
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || || || || || || || || |||||||| | || || ||||| |
Sbjct 8845 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 8904
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | |||| | | ||| | || ||||| | | | || |||
Sbjct 8905 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAG 8964
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| | ||||||| || | || |||||||| | | ||
Sbjct 8965 GCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGT-CGCGTTCATGCCAAGAAGAG 9023
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|||| || | ||| | || | ||| ||||| || || ||||| || ||
Sbjct 9024 CGACGGGGAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTC 9072
>seq2315
Length=136826
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 44858
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 44857 CTCCACCTCGTCCT 44844
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 91790 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 91849
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 91850 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 91909
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 91910 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 91969
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 91970 CTCCACCTCGTCCT 91983
>seq2223
Length=69470
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 44858
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 44857 CTCCACCTCGTCCT 44844
>seq1971
Length=47716
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 26952
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 26953 CTCCACCTCGTCCT 26966
>seq1718
Length=45196
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 26952
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 26953 CTCCACCTCGTCCT 26966
>seq819
Length=68040
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | ||||| || | |||||| |||| | || || | |||||||||||| | |||
Sbjct 23004 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 23063
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || || || || || || | || |||| || |
Sbjct 23064 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 23123
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
||||| || ||||| |||| | | |||||||||| ||||| || ||||| |||
Sbjct 23124 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGAGAGCACT 23183
Query 26967 ATCCATCTGGTCCT 26980
|||| || |||||
Sbjct 23184 CTCCACCTCGTCCT 23197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478644085179920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |