Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 105 6e-18
seq2223 105 6e-18
seq1971 105 6e-18
seq1718 105 6e-18
seq819 105 6e-18
seq911 98.7 9e-16
seq2536 82.4 7e-11
>seq2315
Length=136826
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 44865
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 91790 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 91849
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 91850 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 91909
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 91910 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 91962
>seq2223
Length=69470
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 44918
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 44865
>seq1971
Length=47716
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 26945
>seq1718
Length=45196
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 26773 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 26832
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 26833 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 26892
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 26893 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 26945
>seq819
Length=68040
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 23004 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 23063
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||||| || |
Sbjct 23064 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCC 23123
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGA 24181
|||||||| ||||| |||| | | | ||||||| || ||||| || |||||
Sbjct 23124 GGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAAGA 23176
>seq911
Length=71809
Score = 98.7 bits (108), Expect = 9e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| | | |||||||||||| | ||||| ||||| |||
Sbjct 45302 ATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGCAAGATCCAGGAC 45243
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || || || || ||| | ||||||| || ||||||||| ||||| |||
Sbjct 45242 AAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGAT 45183
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCA 24193
| | | | ||||||| || ||||| || || || || || ||||
Sbjct 45182 GGCCGCACTCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTTCA 45136
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | ||||| || | || ||| |||| |||||| | | |||||||||||| | |||
Sbjct 45037 ACAGTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTC 44978
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| ||||| ||||| || ||||| || || || || ||| | ||||| | || |
Sbjct 44977 AAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCC 44918
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACA 24188
|||||||| ||||| |||| | | | | ||||| || ||||| || || || || ||
Sbjct 44917 GGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAAGGAGTCGACC 44858
Query 24189 ATTCA 24193
||||
Sbjct 44857 CTTCA 44853
>seq2536
Length=61238
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| |||| |||||| |
Sbjct 20424 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 20483
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| |||||| ||||| || ||||| || || || ||
Sbjct 20484 GACACCATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 20543
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||||| || ||||||||| ||||| |||| | | | | | ||| || |||
Sbjct 20544 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAAC 20603
Query 24171 ATTCAAAA 24178
|| || ||
Sbjct 20604 ATCCAGAA 20611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429919960834455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |