Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2315 120 2e-22 seq2223 120 2e-22 seq1971 120 2e-22 seq1718 120 2e-22 seq819 120 2e-22 seq2536 86.0 5e-12 seq911 84.2 2e-11 >seq2315 Length=136826 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 44736 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 92211 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 92152 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 92151 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 92092 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 92091 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 92033 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 92032 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000 >seq2223 Length=69470 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 44736 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 >seq1971 Length=47716 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 27074 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 >seq1718 Length=45196 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 27074 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 >seq819 Length=68040 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||||| || || || ||||| Sbjct 23425 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 23366 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || |||||||| | || || ||||| |||||| || | |||||| ||||| Sbjct 23365 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 23306 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 23305 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 23247 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 23246 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214 >seq2536 Length=61238 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 16746 CCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAA 16805 |||| || ||||||||||||| || ||| | | ||||| | || ||||| || ||| Sbjct 20613 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 20554 Query 16806 TAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGG 16864 | || ||||| |||||| || | |||||| ||||| ||| ||||| ||| || | | Sbjct 20553 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGCT-CTTGACATTG 20495 Query 16865 CCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924 | | ||||| | ||| || | ||||||||| || || || || || ||||| Sbjct 20494 TCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 20435 Query 16925 AAAATCTGCAT 16935 || |||||||| Sbjct 20434 AAGATCTGCAT 20424 >seq911 Length=71809 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||| | || | | ||| Sbjct 44616 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCC 44675 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 || | || |||||||| | || || ||||| |||||| || | |||||| |||| | Sbjct 44676 TCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||||| ||| || | | | | || ||| | ||| |||| || ||||| Sbjct 44736 TGGATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| ||||| || |||||||| Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405072887812390