Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 120 2e-22
seq2223 120 2e-22
seq1971 120 2e-22
seq1718 120 2e-22
seq819 120 2e-22
seq2536 86.0 5e-12
seq911 84.2 2e-11
>seq2315
Length=136826
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 44736 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 92211 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 92152
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 92151 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 92092
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 92091 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 92033
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 92032 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
>seq2223
Length=69470
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 44616 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 44675
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 44676 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 44736 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
>seq1971
Length=47716
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 27074 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq1718
Length=45196
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 27194 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 27135
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 27134 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 27075
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 27074 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 27016
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 27015 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq819
Length=68040
Score = 120 bits (132), Expect = 2e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||||| || || || |||||
Sbjct 23425 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCC 23366
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || |||||||| | || || ||||| |||||| || | |||||| |||||
Sbjct 23365 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 23306
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 23305 TGAATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 23247
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 23246 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
>seq2536
Length=61238
Score = 86.0 bits (94), Expect = 5e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 16746 CCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAA 16805
|||| || ||||||||||||| || ||| | | ||||| | || ||||| || |||
Sbjct 20613 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAA 20554
Query 16806 TAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGG 16864
| || ||||| |||||| || | |||||| ||||| ||| ||||| ||| || | |
Sbjct 20553 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGCT-CTTGACATTG 20495
Query 16865 CCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACA 16924
| | ||||| | ||| || | ||||||||| || || || || || |||||
Sbjct 20494 TCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 20435
Query 16925 AAAATCTGCAT 16935
|| ||||||||
Sbjct 20434 AAGATCTGCAT 20424
>seq911
Length=71809
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || |||||||||||| | || | | |||
Sbjct 44616 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCC 44675
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842
|| | || |||||||| | || || ||||| |||||| || | |||||| |||| |
Sbjct 44676 TCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 44735
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
| | ||||| ||| || | | | | || ||| | ||| |||| || |||||
Sbjct 44736 TGGATCTTGCT-CTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||| ||||| || ||||||||
Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405072887812390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |