Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2803 93.3 5e-14 seq1977 93.3 5e-14 >seq2803 Length=29324 Score = 93.3 bits (102), Expect = 5e-14 Identities = 265/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545 |||| |||||||| || || | || || | |||||||| |||||||| || | Sbjct 2398 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 2457 Query 63546 CTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 | || || || | ||||| || || || |||||||| | ||| ||||| || || || Sbjct 2458 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 2516 Query 63605 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63664 | | ||| || || | | ||| || | || | ||| || ||||| || || Sbjct 2517 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 2576 Query 63665 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63724 | ||| ||||| || || || | ||| | |||||||| | || | ||||| Sbjct 2577 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 2636 Query 63725 ACTACATCCATGGTAATACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGAC 63783 || | || | || | |||| | || || ||| | ||||||| ||||| || ||||| Sbjct 2637 ACAATTTCGAATGTC-TCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 2695 Query 63784 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843 ||||||| | | ||| | || || | |||| | || || || | ||||| || || Sbjct 2696 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 2755 Query 63844 TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 || ||||| || | || || |||||||| || || ||||| Sbjct 2756 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 2797 >seq1977 Length=29324 Score = 93.3 bits (102), Expect = 5e-14 Identities = 265/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545 |||| |||||||| || || | || || | |||||||| |||||||| || | Sbjct 2398 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 2457 Query 63546 CTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 | || || || | ||||| || || || |||||||| | ||| ||||| || || || Sbjct 2458 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 2516 Query 63605 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63664 | | ||| || || | | ||| || | || | ||| || ||||| || || Sbjct 2517 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 2576 Query 63665 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63724 | ||| ||||| || || || | ||| | |||||||| | || | ||||| Sbjct 2577 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 2636 Query 63725 ACTACATCCATGGTAATACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGAC 63783 || | || | || | |||| | || || ||| | ||||||| ||||| || ||||| Sbjct 2637 ACAATTTCGAATGTC-TCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 2695 Query 63784 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843 ||||||| | | ||| | || || | |||| | || || || | ||||| || || Sbjct 2696 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 2755 Query 63844 TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 || ||||| || | || || |||||||| || || ||||| Sbjct 2756 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 2797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633607755655600