Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq95 116 3e-21 >seq95 Length=22970 Score = 116 bits (128), Expect = 3e-21 Identities = 207/301 (69%), Gaps = 1/301 (0%) Strand=Plus/Minus Query 20353 AGCT-ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCG 20411 |||| ||||| || || |||| ||| || || || || |||||| | || ||||| Sbjct 9150 AGCTGACATAGAACTGCGCGAACATGTGGCAAGGTGGCAGAGCCATCTTCTTCAGGTCCG 9091 Query 20412 CCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA 20471 |||| |||||||| | ||| ||||| | | ||||| ||| || || || | || | Sbjct 9090 CCGGATTCCACGCGCTCATGATGATGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGA 9031 Query 20472 CAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACG 20531 | || || || || || | || || || | ||||| | ||||||||||||| Sbjct 9030 TCACGTCCGCCAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACT 8971 Query 20532 CCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGT 20591 | || || ||||||| ||||||||| ||||| || || || | || |||||| | || Sbjct 8970 CAGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGT 8911 Query 20592 GCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTC 20651 ||| |||||| | | | |||||||| | || || || ||||| |||||||| | Sbjct 8910 GCGAGAGGCCGACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGC 8851 Query 20652 C 20652 | Sbjct 8850 C 8850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441355911973240