Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1544 93.3 4e-14 seq911 87.8 2e-12 seq2315 84.2 2e-11 seq2223 84.2 2e-11 seq1971 84.2 2e-11 seq1718 84.2 2e-11 seq819 84.2 2e-11 seq2536 82.4 8e-11 >seq1544 Length=65416 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| ||||| || || || |||||||| || Sbjct 20717 ACCACCACGCAGGCGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 20658 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || ||||||||||||||||| |||| || ||||||||||| || || Sbjct 20657 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 20598 Query 64336 AATTCCTTCTTTTTCTTGT 64354 ||| || || || || ||| Sbjct 20597 AATGCCCTCCTTGTCCTGT 20579 >seq911 Length=71809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| ||||| || || || |||||||| || || ||||| | || Sbjct 44615 AAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATC 44674 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || || ||||||||||| || || || || || || || Sbjct 44675 CTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 44734 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| | || || || | || | ||| Sbjct 44735 CTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGT 44794 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | || || ||||| || ||||| Sbjct 44795 CTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | ||| || | || | ||||| || ||||| ||||||||||| | | Sbjct 44373 CCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAG 44432 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | || || ||||||||||| || | || || ||||||||||| || || Sbjct 44433 AGCGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 44492 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || | ||||| Sbjct 44493 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACC 44552 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 44553 TCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 44599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 45111 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 45170 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || |||||||||||||| |||| || ||||||||||| || || Sbjct 45171 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 45230 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| || || || || || || || Sbjct 45231 AATGCCCTCCTTGTCCTGGATCTT 45254 >seq2315 Length=136826 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 45111 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 45170 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 45171 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 45230 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 45231 AATGCCTTCCTTGTCCTGGATCTT 45254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 91716 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 91657 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 91656 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 91597 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 91596 AATGCCTTCCTTGTCCTGGATCTT 91573 >seq2223 Length=69470 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 45111 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 45170 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 45171 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 45230 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 45231 AATGCCTTCCTTGTCCTGGATCTT 45254 >seq1971 Length=47716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 26699 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 26640 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 26639 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 26580 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 26579 AATGCCTTCCTTGTCCTGGATCTT 26556 >seq1718 Length=45196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 26699 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 26640 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 26639 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 26580 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 26579 AATGCCTTCCTTGTCCTGGATCTT 26556 >seq819 Length=68040 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| || || || |||||||| || Sbjct 22930 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 22871 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || |||||||||||||| || | ||||| |||||||| || || || Sbjct 22870 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGG 22811 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || || || || || Sbjct 22810 AATGCCTTCCTTGTCCTGGATCTT 22787 >seq2536 Length=61238 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | | |||||| | || || |||||||||||||| |||| Sbjct 20611 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 20552 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || ||||||||||| || ||||| || || || || || || || ||| ||| || Sbjct 20551 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 20492 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || | || || || | || | ||||||||| || | || || ||||| Sbjct 20491 ATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 20432 Query 64436 ATTTGCAT 64443 || ||||| Sbjct 20431 ATCTGCAT 20424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499625682340840