Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2117 86.0 5e-12 seq1181 86.0 5e-12 >seq2117 Length=32078 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 118203 TCTTGATAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCG 118262 ||||| || ||||| |||| |||||| || ||||||||||| || ||||| |||||| Sbjct 18199 TCTTGGTAGTAACCTTCCAAGCTTTTGGGAATGCTGTGATGTATGACGAACCGAACGTCG 18140 Query 118263 GGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 || || || |||||||||||||| || || || Sbjct 18139 GGCTTGTCAATGCCCATCCCGAAGGCGATGGT 18108 >seq1181 Length=55211 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 118203 TCTTGATAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCG 118262 ||||| || ||||| |||| |||||| || ||||||||||| || ||||| |||||| Sbjct 13880 TCTTGGTAGTAACCTTCCAAGCTTTTGGGAATGCTGTGATGTATGACGAACCGAACGTCG 13939 Query 118263 GGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 || || || |||||||||||||| || || || Sbjct 13940 GGCTTGTCAATGCCCATCCCGAAGGCGATGGT 13971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381758557607784