Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2315 91.5 1e-13 seq2223 91.5 1e-13 seq1971 91.5 1e-13 seq1718 91.5 1e-13 seq911 91.5 1e-13 seq819 91.5 1e-13 seq2536 86.0 6e-12 >seq2315 Length=136826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 44456 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 44457 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 44516 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 92430 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 92371 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 92370 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 92311 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 92310 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 92252 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 92251 GAGGGTCTTAACGAAGATCTGCAT 92228 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 44657 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 44658 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 44718 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 92229 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 92170 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 92169 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 92110 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 92109 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 92051 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 92050 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000 >seq2223 Length=69470 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 44456 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 44457 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 44516 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 44657 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 44658 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 44718 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 >seq1971 Length=47716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 27413 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 27354 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 27353 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 27294 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 27293 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 27235 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 27234 GAGGGTCTTAACGAAGATCTGCAT 27211 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 27212 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 27153 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 27152 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 27093 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 27092 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 27034 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 27033 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 >seq1718 Length=45196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 27413 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 27354 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 27353 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 27294 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 27293 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 27235 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 27234 GAGGGTCTTAACGAAGATCTGCAT 27211 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 27212 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 27153 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 27152 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 27093 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 27092 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 27034 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 27033 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 >seq911 Length=71809 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| || | || Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCGAGCTGC 44456 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | |||| || ||||||||||| || ||||| || || || || || || Sbjct 44457 TTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 44516 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| || || || || || ||||| ||||| || || ||| Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 44657 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 |||| || ||| || | || || || ||| | |||| || ||||||||||| Sbjct 44658 CTGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || |||| || | || | ||| ||||| ||||| Sbjct 44718 GGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 >seq819 Length=68040 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || ||||| || || | ||| ||||| || Sbjct 23644 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 23585 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| || || || || || || || || || Sbjct 23584 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 23525 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||||||||| || || ||||| |||| ||| ||||| || Sbjct 23524 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 23466 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 23465 GAGGGTCTTAACGAAGATCTGCAT 23442 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||||| || || ||||| ||||| || || ||| Sbjct 23443 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 23384 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||| || || || ||| | |||| || ||||||||||| Sbjct 23383 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 23324 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| ||||| ||||| Sbjct 23323 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 23265 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || |||||||| || || || || || || ||||| Sbjct 23264 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214 >seq2536 Length=61238 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | |||| || ||||||||||| |||||||| || || || ||||| Sbjct 20569 TGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATC 20510 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || |||| || | |||||| ||||||||||| ||||| || | || ||||| Sbjct 20509 TTGCTCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCC 20450 Query 45315 GTTAGAGTTTTTACAAAAATTTGCATCGCG 45344 || || || || || || || ||||| ||| Sbjct 20449 GTGAGGGTCTTGACGAAGATCTGCATGGCG 20420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985905227560