Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 91.5 1e-13
seq2223 91.5 1e-13
seq1971 91.5 1e-13
seq1718 91.5 1e-13
seq911 91.5 1e-13
seq819 91.5 1e-13
seq2536 86.0 6e-12
>seq2315
Length=136826
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 44456
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 44457 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 44516
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 92430 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 92371
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 92370 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 92311
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 92310 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 92252
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 92251 GAGGGTCTTAACGAAGATCTGCAT 92228
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 44657
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 44658 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 44718 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 92229 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 92170
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 92169 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 92110
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 92109 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 92051
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 92050 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
>seq2223
Length=69470
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 44456
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 44457 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 44516
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 44657
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 44658 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 44718 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
>seq1971
Length=47716
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 27413 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 27354
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 27353 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 27294
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 27293 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 27235
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 27234 GAGGGTCTTAACGAAGATCTGCAT 27211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 27212 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 27153
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 27152 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 27093
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 27092 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 27034
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 27033 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq1718
Length=45196
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 27413 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 27354
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 27353 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 27294
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 27293 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 27235
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 27234 GAGGGTCTTAACGAAGATCTGCAT 27211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 27212 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 27153
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 27152 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 27093
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 27092 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 27034
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 27033 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
>seq911
Length=71809
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| || | ||
Sbjct 44397 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCGAGCTGC 44456
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | |||| || ||||||||||| || ||||| || || || || || ||
Sbjct 44457 TTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTC 44516
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 44517 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 44575
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 44576 GAGGGTCTTAACGAAGATCTGCAT 44599
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| || || || || || ||||| ||||| || || |||
Sbjct 44598 ATGCCACCACGGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 44657
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|||| || ||| || | || || || ||| | |||| || |||||||||||
Sbjct 44658 CTGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 44717
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || || || || |||| || | || | ||| ||||| |||||
Sbjct 44718 GGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 44776
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 44777 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
>seq819
Length=68040
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || ||||| || || | ||| ||||| ||
Sbjct 23644 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAACTGC 23585
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || ||||||||||| || || || || || || || || ||
Sbjct 23584 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 23525
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || | |||||||||||| || || ||||| |||| ||| ||||| ||
Sbjct 23524 GACTTCA-CGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTGCCAGT 23466
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || |||||
Sbjct 23465 GAGGGTCTTAACGAAGATCTGCAT 23442
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | ||||| || || ||||| ||||| || || |||
Sbjct 23443 ATGCCACCACGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 23384
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || |||| || || || ||| | |||| || |||||||||||
Sbjct 23383 GACAGAGTCCTGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGG 23324
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || || || ||||| || |||| || | || | ||| ||||| |||||
Sbjct 23323 GGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTC 23265
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| || |||||||| || || || || || || |||||
Sbjct 23264 AACCTCCAATGTAATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
>seq2536
Length=61238
Score = 86.0 bits (94), Expect = 6e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
|| || || ||| | |||| || ||||||||||| |||||||| || || || |||||
Sbjct 20569 TGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATC 20510
Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314
|| |||| || | |||||| ||||||||||| ||||| || | || |||||
Sbjct 20509 TTGCTCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCC 20450
Query 45315 GTTAGAGTTTTTACAAAAATTTGCATCGCG 45344
|| || || || || || || ||||| |||
Sbjct 20449 GTGAGGGTCTTGACGAAGATCTGCATGGCG 20420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451985905227560
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