Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2803 122 1e-22
seq1977 122 1e-22
>seq2803
Length=29324
Score = 122 bits (134), Expect = 1e-22
Identities = 866/1380 (63%), Gaps = 30/1380 (2%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 700 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 759
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| ||||||| || | ||||| |||| | |||| | || || | ||||
Sbjct 760 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 819
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| || | || |||||||||||||| || || || || ||||| | || |
Sbjct 820 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 879
Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
| | | || | | ||||| || || ||||||| ||| || ||||||||||
Sbjct 880 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 936
Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822
| | ||| | || |||||||| | | ||| | | |||||| | | |
Sbjct 937 TGTTGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCTTCATCTGATCAG 996
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCAC 115882
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 997 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 1056
Query 115883 CCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 115941
| |||||| || | ||| |||||||| | || || ||||| || ||||||||| |
Sbjct 1057 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 1114
Query 115942 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000
|| ||| | ||||| | ||||| |||||||| || || | ||| | | |||||||
Sbjct 1115 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 1174
Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 116060
||| | ||| |||| | | ||||||||| || | | | |
Sbjct 1175 ACCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTT 1234
Query 116061 CTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 116120
| |||||| ||| | || || || || |||||||| || |||| || || || ||
Sbjct 1235 ATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTA 1294
Query 116121 TGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
||||| || || || | || ||| || ||| || ||||| || || ||
Sbjct 1295 AGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGT 1351
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||| || || || |||| ||||||||| ||||| |||| | |||
Sbjct 1352 CTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGC 1411
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
|| || | || || ||||| | |||||| | | || || || || | ||| ||
Sbjct 1412 AAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCT 1471
Query 116298 CTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 116356
||| | || ||| | | || || || | || || | | | || ||||| |||
Sbjct 1472 CTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGA 1530
Query 116357 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCA 116412
| |||| || | || |||||||| | | | || | | || | ||| ||
Sbjct 1531 CAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACA 1586
Query 116413 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 116472
| ||| | | || || || | ||||| | || ||||||| | ||||| | |
Sbjct 1587 TCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCG 1646
Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532
|||||||| | ||||| |||| || || || ||||||||| | |||||| ||
Sbjct 1647 GTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGG 1706
Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592
|| ||| ||| || |||||||| | ||| | || | || || || |||
Sbjct 1707 TTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGG 1766
Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651
| || ||| || || | ||| | | || | | || ||||| || | || |||||
Sbjct 1767 GCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTC 1825
Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTG 116710
|| ||| |||| |||||||||||| || || ||||| | || | || | || || |
Sbjct 1826 CTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACC-ATAGACGTCGGCAAGACCAG 1884
Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770
| || | || || | ||| | ||| || || |||||| |||||||||||||
Sbjct 1885 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 1944
Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830
| || || |||||||| || |||| || || ||| |||| | || || | || || |
Sbjct 1945 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 2004
Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890
| ||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 2005 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 2064
>seq1977
Length=29324
Score = 122 bits (134), Expect = 1e-22
Identities = 866/1380 (63%), Gaps = 30/1380 (2%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 700 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 759
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| ||||||| || | ||||| |||| | |||| | || || | ||||
Sbjct 760 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 819
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| || | || |||||||||||||| || || || || ||||| | || |
Sbjct 820 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 879
Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
| | | || | | ||||| || || ||||||| ||| || ||||||||||
Sbjct 880 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 936
Query 115763 TATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822
| | ||| | || |||||||| | | ||| | | |||||| | | |
Sbjct 937 TGTTGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCTTCATCTGATCAG 996
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCAC 115882
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 997 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 1056
Query 115883 CCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 115941
| |||||| || | ||| |||||||| | || || ||||| || ||||||||| |
Sbjct 1057 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 1114
Query 115942 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000
|| ||| | ||||| | ||||| |||||||| || || | ||| | | |||||||
Sbjct 1115 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 1174
Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 116060
||| | ||| |||| | | ||||||||| || | | | |
Sbjct 1175 ACCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTT 1234
Query 116061 CTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 116120
| |||||| ||| | || || || || |||||||| || |||| || || || ||
Sbjct 1235 ATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTA 1294
Query 116121 TGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
||||| || || || | || ||| || ||| || ||||| || || ||
Sbjct 1295 AGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGT 1351
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||| || || || |||| ||||||||| ||||| |||| | |||
Sbjct 1352 CTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGC 1411
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
|| || | || || ||||| | |||||| | | || || || || | ||| ||
Sbjct 1412 AAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCT 1471
Query 116298 CTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 116356
||| | || ||| | | || || || | || || | | | || ||||| |||
Sbjct 1472 CTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGA 1530
Query 116357 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCA 116412
| |||| || | || |||||||| | | | || | | || | ||| ||
Sbjct 1531 CAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACA 1586
Query 116413 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 116472
| ||| | | || || || | ||||| | || ||||||| | ||||| | |
Sbjct 1587 TCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCG 1646
Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532
|||||||| | ||||| |||| || || || ||||||||| | |||||| ||
Sbjct 1647 GTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGG 1706
Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592
|| ||| ||| || |||||||| | ||| | || | || || || |||
Sbjct 1707 TTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGG 1766
Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651
| || ||| || || | ||| | | || | | || ||||| || | || |||||
Sbjct 1767 GCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTC 1825
Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTG 116710
|| ||| |||| |||||||||||| || || ||||| | || | || | || || |
Sbjct 1826 CTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACC-ATAGACGTCGGCAAGACCAG 1884
Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770
| || | || || | ||| | ||| || || |||||| |||||||||||||
Sbjct 1885 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 1944
Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830
| || || |||||||| || |||| || || ||| |||| | || || | || || |
Sbjct 1945 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 2004
Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890
| ||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 2005 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 2064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613483725680760
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |