Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1237 183 5e-41 seq2803 96.9 6e-15 seq1977 96.9 6e-15 >seq1237 Length=76238 Score = 183 bits (202), Expect = 5e-41 Identities = 340/496 (69%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||| |||||||| | | || || |||||||| |||| ||||| Sbjct 8863 CTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTT 8922 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 || || ||| |||| || || ||| |||||| | ||| || || || || Sbjct 8923 GGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAGGCGGTCAGCAACGAACTC 8982 Query 159769 GATGTAGCTACACATCTGC-TCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| ||||| | || | ||| || || || || |||||||| || |||| Sbjct 8983 GATGTACTGGCACATGAGAGTCGC-GTTCATGCCAAGAAGAGCGACGGGGAGAGCGTCCG 9041 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 || ||||||||||| |||||||| || ||||| | |||| | |||| |||| | Sbjct 9042 TGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATCTTCTCGACAGATTCGGGGC 9101 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 ||||| | | || || | ||||| ||||| || |||||| |||| |||| Sbjct 9102 TGGGCTT---CGACTTGATGTGCGAGAACAGCAGGCAGGCGAAGTCGGTATGCATGCCCT 9158 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 | || |||||||||| ||| ||||| | | | || ||||||| |||||| |||| Sbjct 9159 CATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTCTTGA 9218 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067 |||| ||||||| || |||| ||||| || ||||| ||||| |||||||| || || | Sbjct 9219 GCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAAGCAA 9278 Query 160068 CGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCT 160127 ||| | | | || | | ||| |||| | |||| | |||||| || |||| Sbjct 9279 TGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCCAACGAAGGGCCCAGTCGGCCT 9338 Query 160128 TCTTTGCGATGCACGG 160143 |||| ||||||||| Sbjct 9339 TCTTCTTGATGCACGG 9354 >seq2803 Length=29324 Score = 96.9 bits (106), Expect = 6e-15 Identities = 327/496 (66%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || ||| || |||||||| |||| | || | || |||||| | | || ||||||||| Sbjct 689 CTGGTCGACAGTGAACTGGATGG-GAGCAGCAGC-GGCCTGGGTGCGGAGGTAGTACATG 746 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| ||||| || ||| || | |||||| || | | |||| || || Sbjct 747 CCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTG 806 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||||| |||||| || || || ||||| ||| |||||||| | | || || ||| Sbjct 807 GGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCG 866 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | ||||| ||| |||| |||||| || |||||| | | || || || | Sbjct 867 GCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 925 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | || | | | | | ||| || |||||||| ||| || | | || Sbjct 926 GTCATCTGGGATGT-TGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCT 984 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||| || ||||| | || | | | | || ||| || || ||||||| Sbjct 985 TCATCTGATCAGACCACA-GTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACA 1043 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| || || | || | | | | ||| ||| | || ||||| Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| ||| ||||| |||||| ||| ||| |||||||| ||||| | ||||| | Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163 Query 204314 GAGTTGCGCACACCGT 204329 |||||||| ||||| Sbjct 1164 GAGTTGCGGGTACCGT 1179 >seq1977 Length=29324 Score = 96.9 bits (106), Expect = 6e-15 Identities = 327/496 (66%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || ||| || |||||||| |||| | || | || |||||| | | || ||||||||| Sbjct 689 CTGGTCGACAGTGAACTGGATGG-GAGCAGCAGC-GGCCTGGGTGCGGAGGTAGTACATG 746 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| ||||| || ||| || | |||||| || | | |||| || || Sbjct 747 CCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTG 806 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||||| |||||| || || || ||||| ||| |||||||| | | || || ||| Sbjct 807 GGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCG 866 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | ||||| ||| |||| |||||| || |||||| | | || || || | Sbjct 867 GCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 925 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | || | | | | | ||| || |||||||| ||| || | | || Sbjct 926 GTCATCTGGGATGT-TGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCT 984 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||| || ||||| | || | | | | || ||| || || ||||||| Sbjct 985 TCATCTGATCAGACCACA-GTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACA 1043 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| || || | || | | | | ||| ||| | || ||||| Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| ||| ||||| |||||| ||| ||| |||||||| ||||| | ||||| | Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163 Query 204314 GAGTTGCGCACACCGT 204329 |||||||| ||||| Sbjct 1164 GAGTTGCGGGTACCGT 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795124775374160