Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1237 183 5e-41
seq2803 96.9 6e-15
seq1977 96.9 6e-15
>seq1237
Length=76238
Score = 183 bits (202), Expect = 5e-41
Identities = 340/496 (69%), Gaps = 5/496 (1%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| ||||| |||||||| | | || || |||||||| |||| |||||
Sbjct 8863 CTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTT 8922
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
|| || ||| |||| || || ||| |||||| | ||| || || || ||
Sbjct 8923 GGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAGGCGGTCAGCAACGAACTC 8982
Query 159769 GATGTAGCTACACATCTGC-TCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827
|||||| ||||| | || | ||| || || || || |||||||| || ||||
Sbjct 8983 GATGTACTGGCACATGAGAGTCGC-GTTCATGCCAAGAAGAGCGACGGGGAGAGCGTCCG 9041
Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887
|| ||||||||||| |||||||| || ||||| | |||| | |||| |||| |
Sbjct 9042 TGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATCTTCTCGACAGATTCGGGGC 9101
Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947
||||| | | || || | ||||| ||||| || |||||| |||| ||||
Sbjct 9102 TGGGCTT---CGACTTGATGTGCGAGAACAGCAGGCAGGCGAAGTCGGTATGCATGCCCT 9158
Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007
| || |||||||||| ||| ||||| | | | || ||||||| |||||| ||||
Sbjct 9159 CATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTCTTGA 9218
Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067
|||| ||||||| || |||| ||||| || ||||| ||||| |||||||| || || |
Sbjct 9219 GCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAAGCAA 9278
Query 160068 CGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCT 160127
||| | | | || | | ||| |||| | |||| | |||||| || ||||
Sbjct 9279 TGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCCAACGAAGGGCCCAGTCGGCCT 9338
Query 160128 TCTTTGCGATGCACGG 160143
|||| |||||||||
Sbjct 9339 TCTTCTTGATGCACGG 9354
>seq2803
Length=29324
Score = 96.9 bits (106), Expect = 6e-15
Identities = 327/496 (66%), Gaps = 10/496 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || |||||||| |||| | || | || |||||| | | || |||||||||
Sbjct 689 CTGGTCGACAGTGAACTGGATGG-GAGCAGCAGC-GGCCTGGGTGCGGAGGTAGTACATG 746
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|||||||| ||||| || ||| || | |||||| || | | |||| || ||
Sbjct 747 CCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTG 806
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||||| |||||| || || || ||||| ||| |||||||| | | || || |||
Sbjct 807 GGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCG 866
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | | ||||| ||| |||| |||||| || |||||| | | || || || |
Sbjct 867 GCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 925
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | | | | | ||| || |||||||| ||| || | | ||
Sbjct 926 GTCATCTGGGATGT-TGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCT 984
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| ||| || ||||| | || | | | | || ||| || || |||||||
Sbjct 985 TCATCTGATCAGACCACA-GTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACA 1043
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || |||| || || | || | | | | ||| ||| | || |||||
Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||| ||| ||||| |||||| ||| ||| |||||||| ||||| | ||||| |
Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163
Query 204314 GAGTTGCGCACACCGT 204329
|||||||| |||||
Sbjct 1164 GAGTTGCGGGTACCGT 1179
>seq1977
Length=29324
Score = 96.9 bits (106), Expect = 6e-15
Identities = 327/496 (66%), Gaps = 10/496 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || |||||||| |||| | || | || |||||| | | || |||||||||
Sbjct 689 CTGGTCGACAGTGAACTGGATGG-GAGCAGCAGC-GGCCTGGGTGCGGAGGTAGTACATG 746
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|||||||| ||||| || ||| || | |||||| || | | |||| || ||
Sbjct 747 CCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTG 806
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||||| |||||| || || || ||||| ||| |||||||| | | || || |||
Sbjct 807 GGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCG 866
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | | ||||| ||| |||| |||||| || |||||| | | || || || |
Sbjct 867 GCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 925
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | | | | | ||| || |||||||| ||| || | | ||
Sbjct 926 GTCATCTGGGATGT-TGGGGATCTGCTGAATAGAGCCGTTCGAGGCAATGATGCGGTTCT 984
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| ||| || ||||| | || | | | | || ||| || || |||||||
Sbjct 985 TCATCTGATCAGACCACA-GTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACA 1043
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || |||| || || | || | | | | ||| ||| | || |||||
Sbjct 1044 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 1103
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||| ||| ||||| |||||| ||| ||| |||||||| ||||| | ||||| |
Sbjct 1104 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 1163
Query 204314 GAGTTGCGCACACCGT 204329
|||||||| |||||
Sbjct 1164 GAGTTGCGGGTACCGT 1179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795124775374160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |