Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2803 129 7e-25
seq1977 129 7e-25
seq1237 95.1 2e-14
>seq2803
Length=29324
Score = 129 bits (142), Expect = 7e-25
Identities = 426/652 (65%), Gaps = 19/652 (3%)
Strand=Plus/Minus
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
|| ||||| |||||||| || | || || || | ||| ||||| || | | |||
Sbjct 2341 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 2282
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
|||||| || | || || |||| ||| || | |||||| ||||| |||
Sbjct 2281 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 2222
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGG 111904
|| ||||||||||| || || | || || | |||| | | | ||| ||
Sbjct 2221 GCCGGTGGTATCGGTCTGAACGTTCACCGCATCCGTGCCA-CTGGCAGCTACATTGCCGG 2163
Query 111905 TACAAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
||| || || | | || | || | || || ||||| || || | ||| ||| || |
Sbjct 2162 TACTAACGGCACCAGCA-ACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 2104
Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGC 112017
|||| || |||| | ||| | |||| || || |||| |||| || ||||
Sbjct 2103 GCTACGTTGACCAGGGTGG---TAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGC 2047
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
| ||||| || ||| || | || || || | ||| ||||| || | |||||||
Sbjct 2046 CGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGG 1987
Query 112078 --CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
|||| | || || || |||| ||||||||||||||| ||||||||||||||| | ||
Sbjct 1986 TTCGCGCT--CGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 1929
Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195
|||| ||| |||| ||| | ||| | || || || || || ||||| |||| |
Sbjct 1928 TGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGT 1869
Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255
| |||||||| || || ||||||||| |||| ||| | || |||| | |
Sbjct 1868 CTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGA 1809
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
||| || | ||| | || | | ||| | || || ||| || | || ||| || ||||
Sbjct 1808 GACTGTCCGTGCT-CAGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTA 1750
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366
|| | ||| | ||||| ||| ||| |||| ||||| || || |||||
Sbjct 1749 ACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAA 1698
>seq1977
Length=29324
Score = 129 bits (142), Expect = 7e-25
Identities = 426/652 (65%), Gaps = 19/652 (3%)
Strand=Plus/Minus
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
|| ||||| |||||||| || | || || || | ||| ||||| || | | |||
Sbjct 2341 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 2282
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
|||||| || | || || |||| ||| || | |||||| ||||| |||
Sbjct 2281 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 2222
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGG 111904
|| ||||||||||| || || | || || | |||| | | | ||| ||
Sbjct 2221 GCCGGTGGTATCGGTCTGAACGTTCACCGCATCCGTGCCA-CTGGCAGCTACATTGCCGG 2163
Query 111905 TACAAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
||| || || | | || | || | || || ||||| || || | ||| ||| || |
Sbjct 2162 TACTAACGGCACCAGCA-ACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 2104
Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGC 112017
|||| || |||| | ||| | |||| || || |||| |||| || ||||
Sbjct 2103 GCTACGTTGACCAGGGTGG---TAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGC 2047
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
| ||||| || ||| || | || || || | ||| ||||| || | |||||||
Sbjct 2046 CGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGG 1987
Query 112078 --CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135
|||| | || || || |||| ||||||||||||||| ||||||||||||||| | ||
Sbjct 1986 TTCGCGCT--CGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 1929
Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195
|||| ||| |||| ||| | ||| | || || || || || ||||| |||| |
Sbjct 1928 TGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGT 1869
Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255
| |||||||| || || ||||||||| |||| ||| | || |||| | |
Sbjct 1868 CTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGA 1809
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
||| || | ||| | || | | ||| | || || ||| || | || ||| || ||||
Sbjct 1808 GACTGTCCGTGCT-CAGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTA 1750
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366
|| | ||| | ||||| ||| ||| |||| ||||| || || |||||
Sbjct 1749 ACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAA 1698
>seq1237
Length=76238
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 102182 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTAT 102241
||| ||| | || || ||| || ||||||||||||||| || || ||| | | ||
Sbjct 9286 GCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCAT 9227
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
|| |||||||||||||| || |||||||| ||| | |||||||| ||||| |||||
Sbjct 9226 TTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTC 9167
Query 102302 TCGTGACGAGGG 102313
||| || |||||
Sbjct 9166 TCGCGATGAGGG 9155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620718648843920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |