Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2507 98.7 1e-15
seq1132 98.7 1e-15
>seq2507
Length=98055
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663
|| || || ||||| ||| ||||||| ||||| || | || ||||| || | || ||
Sbjct 41007 TGCAAAATCGTTCACGAGCATGGTGGGCAGGTCTACATGGACGGTGCCAACATGAACGCC 41066
Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723
||| | ||||| || |||| ||| || ||||| || ||||| ||| | ||
Sbjct 41067 CAGATCGGTCTTTGCTCGCCCGGTGAGATTGGCGCTGATGTCTGCCATCTGAACCTCCAC 41126
Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783
||||| ||||||||||| || || || || ||||| || || ||||| || ||||| ||
Sbjct 41127 AAGACCTTCTGTATTCCCCACGGTGGCGGTGGTCCCGGTGTCGGTCCCATCGGTGTTGCC 41186
Query 159784 AAACATCTCACACCATT 159800
|| || ||| | || ||
Sbjct 41187 AAGCACCTCGCTCCTTT 41203
>seq1132
Length=122349
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663
|| || || ||||| ||| ||||||| ||||| || | || ||||| || | || ||
Sbjct 57049 TGCAAAATCGTTCACGAGCATGGTGGGCAGGTCTACATGGACGGTGCCAACATGAACGCC 56990
Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723
||| | ||||| || |||| ||| || ||||| || ||||| ||| | ||
Sbjct 56989 CAGATCGGTCTTTGCTCGCCCGGTGAGATTGGCGCTGATGTCTGCCATCTGAACCTCCAC 56930
Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783
||||| ||||||||||| || || || || ||||| || || ||||| || ||||| ||
Sbjct 56929 AAGACCTTCTGTATTCCCCACGGTGGCGGTGGTCCCGGTGTCGGTCCCATCGGTGTTGCC 56870
Query 159784 AAACATCTCACACCATT 159800
|| || ||| | || ||
Sbjct 56869 AAGCACCTCGCTCCTTT 56853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588028699690960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |