Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2507 98.7 1e-15 seq1132 98.7 1e-15 >seq2507 Length=98055 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 || || || ||||| ||| ||||||| ||||| || | || ||||| || | || || Sbjct 41007 TGCAAAATCGTTCACGAGCATGGTGGGCAGGTCTACATGGACGGTGCCAACATGAACGCC 41066 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||| | ||||| || |||| ||| || ||||| || ||||| ||| | || Sbjct 41067 CAGATCGGTCTTTGCTCGCCCGGTGAGATTGGCGCTGATGTCTGCCATCTGAACCTCCAC 41126 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||| ||||||||||| || || || || ||||| || || ||||| || ||||| || Sbjct 41127 AAGACCTTCTGTATTCCCCACGGTGGCGGTGGTCCCGGTGTCGGTCCCATCGGTGTTGCC 41186 Query 159784 AAACATCTCACACCATT 159800 || || ||| | || || Sbjct 41187 AAGCACCTCGCTCCTTT 41203 >seq1132 Length=122349 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 || || || ||||| ||| ||||||| ||||| || | || ||||| || | || || Sbjct 57049 TGCAAAATCGTTCACGAGCATGGTGGGCAGGTCTACATGGACGGTGCCAACATGAACGCC 56990 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||| | ||||| || |||| ||| || ||||| || ||||| ||| | || Sbjct 56989 CAGATCGGTCTTTGCTCGCCCGGTGAGATTGGCGCTGATGTCTGCCATCTGAACCTCCAC 56930 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||| ||||||||||| || || || || ||||| || || ||||| || ||||| || Sbjct 56929 AAGACCTTCTGTATTCCCCACGGTGGCGGTGGTCCCGGTGTCGGTCCCATCGGTGTTGCC 56870 Query 159784 AAACATCTCACACCATT 159800 || || ||| | || || Sbjct 56869 AAGCACCTCGCTCCTTT 56853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588028699690960