Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2536 105 4e-18 seq2315 95.1 8e-15 seq2223 95.1 8e-15 seq1971 95.1 8e-15 seq1718 95.1 8e-15 seq819 95.1 8e-15 seq911 82.4 5e-11 >seq2536 Length=61238 Score = 105 bits (116), Expect = 4e-18 Identities = 141/192 (73%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| | || |||| || ||||| || ||||| || || Sbjct 20611 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATC 20552 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| |||||| ||||| || | Sbjct 20551 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGAC--AT--T 20496 Query 34914 ATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| | ||| | ||| || |||| ||| ||||| || |||||||| ||||| || Sbjct 20495 GTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 20436 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 20435 GAAGATCTGCAT 20424 >seq2315 Length=136826 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 44619 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 44678 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 44679 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 44738 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 44739 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 44793 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 44794 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 44828 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 92208 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 92149 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 92148 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 92089 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 92088 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 92034 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 92033 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 91999 >seq2223 Length=69470 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 44619 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 44678 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 44679 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 44738 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 44739 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 44793 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 44794 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 44828 >seq1971 Length=47716 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 27191 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 27132 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 27131 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 27072 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 27071 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 27017 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 27016 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 26982 >seq1718 Length=45196 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 27191 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 27132 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 27131 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 27072 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 27071 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 27017 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 27016 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 26982 >seq819 Length=68040 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | | | || ||| Sbjct 23422 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTCC 23363 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 23362 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 23303 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 23302 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 23248 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 23247 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 23213 >seq911 Length=71809 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/215 (69%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || || ||||| ||||| ||||| || | || |||| || Sbjct 44619 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCG 44678 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 44679 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 44738 Query 34893 ATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| |||| ||||| || | |||||| || | || |||| Sbjct 44739 ATCTTGCTCTTGACGTTGTCGATGGTATCG---GAC--GACTCAACCTCCAATGTAATGG 44793 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || |||||||||||| Sbjct 44794 TCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 44828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324621489239208