Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2315 84.2 2e-11 seq2223 84.2 2e-11 seq1971 84.2 2e-11 seq1718 84.2 2e-11 seq819 84.2 2e-11 >seq2315 Length=136826 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 45136 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 45195 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 45196 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 45255 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 45256 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 91691 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 91632 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 91631 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 91572 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 91571 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 91513 >seq2223 Length=69470 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 45136 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 45195 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 45196 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 45255 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 45256 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314 >seq1971 Length=47716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 26674 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 26615 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 26614 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 26555 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 26554 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496 >seq1718 Length=45196 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 26674 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 26615 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 26614 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 26555 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 26554 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496 >seq819 Length=68040 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||| || ||| | | |||| || | ||| Sbjct 22905 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCAAGCTGC 22846 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 22845 TTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTG 22786 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || | || | ||||| |||| || || || || |||| || |||||||| Sbjct 22785 CTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 22727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396263616462777