Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1237 250 5e-61 >seq1237 Length=76238 Score = 250 bits (276), Expect = 5e-61 Identities = 371/521 (71%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 8845 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 8904 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | ||| ||||| | ||||| Sbjct 8905 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTT--GCCCAGCGCCACCAGC 8962 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | || || ||| |||||||||| | ||||||| || ||||||||| | || Sbjct 8963 AGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCGTTCATGCCAAGAAGA 9022 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||| | ||| | ||||| ||||||||||| |||| || || || | ||| Sbjct 9023 GCGACGGGGAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATC 9082 Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130 | || || |||| || || || | ||| | |||| | | |||| | Sbjct 9083 TTCTCGACAGATTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 9133 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| ||||| | |||| ||| || || || ||||||| | |||||||| | | Sbjct 9134 CAGGCGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAA 9193 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || |||||||||||||| | ||||||||||| ||||||| Sbjct 9194 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAG 9253 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || |||||||| || |||| | | | |||| | | ||||||||| || Sbjct 9254 ATACCCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAG 9313 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| ||| |||||||| ||||||||||||||||| || Sbjct 9314 ATCCAACGAAGGGCCCAGTCGGCCTTCTTCTTGATGCACGG 9354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931497157226240