Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2507 95.1 1e-14
seq1132 95.1 1e-14
>seq2507
Length=98055
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
|| || | ||| || || || ||||| || ||||| || || ||||| || || || ||
Sbjct 41203 AAAGGAGCGAGGTGCTTGGCAACACCGATGGGACCGACACCGGGACCACCGCCACCGTGG 41144
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281
||||||||||| ||||| || | || ||||| || ||||| || ||| |||| ||
Sbjct 41143 GGAATACAGAAGGTCTTGTGGAGGTTCAGATGGCAGACATCAGCGCCAATCTCACCGGGC 41084
Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341
||||| | ||| || || | || ||||| || | || ||||| |||||||
Sbjct 41083 GAGCAAAGACCGATCTGGGCGTTCATGTTGGCACCGTCCATGTAGACCTGCCCACCATGC 41024
Query 138342 TCATGAACGATCTTACA 138358
|| |||||||| || ||
Sbjct 41023 TCGTGAACGATTTTGCA 41007
>seq1132
Length=122349
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
|| || | ||| || || || ||||| || ||||| || || ||||| || || || ||
Sbjct 56853 AAAGGAGCGAGGTGCTTGGCAACACCGATGGGACCGACACCGGGACCACCGCCACCGTGG 56912
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281
||||||||||| ||||| || | || ||||| || ||||| || ||| |||| ||
Sbjct 56913 GGAATACAGAAGGTCTTGTGGAGGTTCAGATGGCAGACATCAGCGCCAATCTCACCGGGC 56972
Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341
||||| | ||| || || | || ||||| || | || ||||| |||||||
Sbjct 56973 GAGCAAAGACCGATCTGGGCGTTCATGTTGGCACCGTCCATGTAGACCTGCCCACCATGC 57032
Query 138342 TCATGAACGATCTTACA 138358
|| |||||||| || ||
Sbjct 57033 TCGTGAACGATTTTGCA 57049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578976246073720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |