Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2507 95.1 1e-14 seq1132 95.1 1e-14 >seq2507 Length=98055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || | ||| || || || ||||| || ||||| || || ||||| || || || || Sbjct 41203 AAAGGAGCGAGGTGCTTGGCAACACCGATGGGACCGACACCGGGACCACCGCCACCGTGG 41144 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||||||||| ||||| || | || ||||| || ||||| || ||| |||| || Sbjct 41143 GGAATACAGAAGGTCTTGTGGAGGTTCAGATGGCAGACATCAGCGCCAATCTCACCGGGC 41084 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| | ||| || || | || ||||| || | || ||||| ||||||| Sbjct 41083 GAGCAAAGACCGATCTGGGCGTTCATGTTGGCACCGTCCATGTAGACCTGCCCACCATGC 41024 Query 138342 TCATGAACGATCTTACA 138358 || |||||||| || || Sbjct 41023 TCGTGAACGATTTTGCA 41007 >seq1132 Length=122349 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || | ||| || || || ||||| || ||||| || || ||||| || || || || Sbjct 56853 AAAGGAGCGAGGTGCTTGGCAACACCGATGGGACCGACACCGGGACCACCGCCACCGTGG 56912 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||||||||| ||||| || | || ||||| || ||||| || ||| |||| || Sbjct 56913 GGAATACAGAAGGTCTTGTGGAGGTTCAGATGGCAGACATCAGCGCCAATCTCACCGGGC 56972 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| | ||| || || | || ||||| || | || ||||| ||||||| Sbjct 56973 GAGCAAAGACCGATCTGGGCGTTCATGTTGGCACCGTCCATGTAGACCTGCCCACCATGC 57032 Query 138342 TCATGAACGATCTTACA 138358 || |||||||| || || Sbjct 57033 TCGTGAACGATTTTGCA 57049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578976246073720