Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1237 95.1 1e-14
seq2803 87.8 2e-12
seq1977 87.8 2e-12
>seq1237
Length=76238
Score = 95.1 bits (104), Expect = 1e-14
Identities = 335/517 (65%), Gaps = 16/517 (3%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066
|| || || || |||||||||| | ||||| | ||| | || |||| ||||
Sbjct 9357 GTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGATCTGCGACAAGAACTCG 9298
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||||||| |||||| |||| || ||| || ||||||||||||||| ||| ||
Sbjct 9297 A-CCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTC 9239
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | | |||| ||| | |||||||| || |||||||| || | ||||| ||
Sbjct 9238 TTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAA 9179
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245
||| || || || || |||||||| | || || || ||| ||| ||| | |
Sbjct 9178 TGAGCTCATCTCTCGCGATGAGGGCATGCATACCGACTTCGCCTGCCTGCTGTTCTCGCA 9119
Query 65246 CTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305
| | || || |||| ||||| || || | ||| | | ||||| || ||||
Sbjct 9118 CATCAAGTCGAAG-CCCAGCCCCGAATCTGTCGAGAAGATCATCACCGAGGCTGTCGAGA 9060
Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365
| ||||| | |||| || |||||| ||||| ||| | || |||||| |
Sbjct 9059 TCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCGCTCTTCTTGGCATGAACGCGACTC 9000
Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCA 65424
|||| | ||||||| |||| || | || || || || || | | | | ||
Sbjct 8999 TCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCT------GGTGGCGCTGGGCA 8946
Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479
| | | ||| ||| || || || ||||| ||||| ||||| || | |
Sbjct 8945 ACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACG 8886
Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
| ||||| |||||||| |||||||| ||||| |||||
Sbjct 8885 GCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 8849
>seq2803
Length=29324
Score = 87.8 bits (96), Expect = 2e-12
Identities = 294/455 (65%), Gaps = 2/455 (0%)
Strand=Plus/Minus
Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659
|||| ||||| | || || |||||||| ||| || | || || || | || |
Sbjct 2064 TCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGA 2005
Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719
|||| || | || |||| ||| | | || || || | | || |||||||| || |
Sbjct 2004 ACCACGGAAAAGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATC 1945
Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779
| ||||||||||| |||||| || || ||| | || | || || || || |
Sbjct 1944 TCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCC 1885
Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839
| ||||| |||||| |||||||| || || ||||||||| ||||||| |||
Sbjct 1884 CTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGG 1825
Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898
||||| | | | |||||| || | | || | | ||| | || || ||| | |
Sbjct 1824 AGGGTCGTGGTCGCGAGACTGT-CCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCC 1766
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
||| || || || | || | ||| | |||||||| || ||| ||||| |||
Sbjct 1765 CAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAAC 1706
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018
|| ||||| | || || || ||||| || || ||| ||||| | ||||||||
Sbjct 1705 CAGAAGAACCTTGGCACCATTCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACC 1646
Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053
| | ||||| ||||| ||||| || || ||
Sbjct 1645 GCTCCTGATGAAGTCGCTGTGTGCAACTTAGCGTC 1611
>seq1977
Length=29324
Score = 87.8 bits (96), Expect = 2e-12
Identities = 294/455 (65%), Gaps = 2/455 (0%)
Strand=Plus/Minus
Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659
|||| ||||| | || || |||||||| ||| || | || || || | || |
Sbjct 2064 TCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGA 2005
Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719
|||| || | || |||| ||| | | || || || | | || |||||||| || |
Sbjct 2004 ACCACGGAAAAGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATC 1945
Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779
| ||||||||||| |||||| || || ||| | || | || || || || |
Sbjct 1944 TCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCC 1885
Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839
| ||||| |||||| |||||||| || || ||||||||| ||||||| |||
Sbjct 1884 CTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGG 1825
Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898
||||| | | | |||||| || | | || | | ||| | || || ||| | |
Sbjct 1824 AGGGTCGTGGTCGCGAGACTGT-CCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCC 1766
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
||| || || || | || | ||| | |||||||| || ||| ||||| |||
Sbjct 1765 CAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAAC 1706
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018
|| ||||| | || || || ||||| || || ||| ||||| | ||||||||
Sbjct 1705 CAGAAGAACCTTGGCACCATTCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACC 1646
Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053
| | ||||| ||||| ||||| || || ||
Sbjct 1645 GCTCCTGATGAAGTCGCTGTGTGCAACTTAGCGTC 1611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596546773755680
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