Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1237 95.1 1e-14 seq2803 87.8 2e-12 seq1977 87.8 2e-12 >seq1237 Length=76238 Score = 95.1 bits (104), Expect = 1e-14 Identities = 335/517 (65%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066 || || || || |||||||||| | ||||| | ||| | || |||| |||| Sbjct 9357 GTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGATCTGCGACAAGAACTCG 9298 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||||||| |||||| |||| || ||| || ||||||||||||||| ||| || Sbjct 9297 A-CCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTC 9239 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | | |||| ||| | |||||||| || |||||||| || | ||||| || Sbjct 9238 TTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAA 9179 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245 ||| || || || || |||||||| | || || || ||| ||| ||| | | Sbjct 9178 TGAGCTCATCTCTCGCGATGAGGGCATGCATACCGACTTCGCCTGCCTGCTGTTCTCGCA 9119 Query 65246 CTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || || |||| ||||| || || | ||| | | ||||| || |||| Sbjct 9118 CATCAAGTCGAAG-CCCAGCCCCGAATCTGTCGAGAAGATCATCACCGAGGCTGTCGAGA 9060 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 | ||||| | |||| || |||||| ||||| ||| | || |||||| | Sbjct 9059 TCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCGCTCTTCTTGGCATGAACGCGACTC 9000 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCA 65424 |||| | ||||||| |||| || | || || || || || | | | | || Sbjct 8999 TCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCT------GGTGGCGCTGGGCA 8946 Query 65425 CCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | ||| ||| || || || ||||| ||||| ||||| || | | Sbjct 8945 ACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACG 8886 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||| |||||||| |||||||| ||||| ||||| Sbjct 8885 GCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 8849 >seq2803 Length=29324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 294/455 (65%), Gaps = 2/455 (0%) Strand=Plus/Minus Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659 |||| ||||| | || || |||||||| ||| || | || || || | || | Sbjct 2064 TCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGA 2005 Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 |||| || | || |||| ||| | | || || || | | || |||||||| || | Sbjct 2004 ACCACGGAAAAGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATC 1945 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | ||||||||||| |||||| || || ||| | || | || || || || | Sbjct 1944 TCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCC 1885 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | ||||| |||||| |||||||| || || ||||||||| ||||||| ||| Sbjct 1884 CTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGG 1825 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898 ||||| | | | |||||| || | | || | | ||| | || || ||| | | Sbjct 1824 AGGGTCGTGGTCGCGAGACTGT-CCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCC 1766 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 ||| || || || | || | ||| | |||||||| || ||| ||||| ||| Sbjct 1765 CAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAAC 1706 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 || ||||| | || || || ||||| || || ||| ||||| | |||||||| Sbjct 1705 CAGAAGAACCTTGGCACCATTCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACC 1646 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 | | ||||| ||||| ||||| || || || Sbjct 1645 GCTCCTGATGAAGTCGCTGTGTGCAACTTAGCGTC 1611 >seq1977 Length=29324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 294/455 (65%), Gaps = 2/455 (0%) Strand=Plus/Minus Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659 |||| ||||| | || || |||||||| ||| || | || || || | || | Sbjct 2064 TCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGA 2005 Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 |||| || | || |||| ||| | | || || || | | || |||||||| || | Sbjct 2004 ACCACGGAAAAGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATC 1945 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | ||||||||||| |||||| || || ||| | || | || || || || | Sbjct 1944 TCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCC 1885 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | ||||| |||||| |||||||| || || ||||||||| ||||||| ||| Sbjct 1884 CTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGG 1825 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898 ||||| | | | |||||| || | | || | | ||| | || || ||| | | Sbjct 1824 AGGGTCGTGGTCGCGAGACTGT-CCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCC 1766 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 ||| || || || | || | ||| | |||||||| || ||| ||||| ||| Sbjct 1765 CAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAAC 1706 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 || ||||| | || || || ||||| || || ||| ||||| | |||||||| Sbjct 1705 CAGAAGAACCTTGGCACCATTCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACC 1646 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 | | ||||| ||||| ||||| || || || Sbjct 1645 GCTCCTGATGAAGTCGCTGTGTGCAACTTAGCGTC 1611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596546773755680