Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq911 127 2e-24 seq2315 123 2e-23 seq2223 123 2e-23 seq1971 123 2e-23 seq1718 123 2e-23 seq819 123 2e-23 >seq911 Length=71809 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44480 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||| |||||| | | | || ||||| ||| Sbjct 44479 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCTGATTACAAC 44420 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881 || ||| ||||||| || || || ||||| |||||| | | | ||| || || | Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCA--CTCTCAGCGACTACA 44650 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||| || ||||| ||||| || ||| ||||| | || | || || ||| Sbjct 44649 ACATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGC 44600 >seq2315 Length=136826 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 44480 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 44479 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 44420 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 92228 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 92287 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 92288 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 92347 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 92348 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 92407 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 92408 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 92455 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 44600 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 92000 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 92059 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 92060 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 92119 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 92120 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 92179 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 92180 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 92227 >seq2223 Length=69470 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 44480 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 44479 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 44420 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 44600 >seq1971 Length=47716 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 27211 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 27270 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 27271 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 27330 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 27331 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 27390 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 27391 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 27210 >seq1718 Length=45196 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 27211 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 27270 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 27271 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 27330 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 27331 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 27390 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 27391 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 27210 >seq819 Length=68040 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || ||||||||||| || ||| | || Sbjct 23442 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 23501 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 23502 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 23561 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||||||| | | | || ||||| ||| Sbjct 23562 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 23621 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| ||||| || |||||||| | || |||| || ||| Sbjct 23622 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 23669 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || ||||| | || || || | || Sbjct 23214 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 23273 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 23274 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 23333 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| || | |||| || || ||| Sbjct 23334 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 23393 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | || || ||| Sbjct 23394 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 23441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449880385793080