Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq911 127 2e-24
seq2315 123 2e-23
seq2223 123 2e-23
seq1971 123 2e-23
seq1718 123 2e-23
seq819 123 2e-23
>seq911
Length=71809
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44480
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||| |||||| | | | || ||||| |||
Sbjct 44479 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCTGATTACAAC 44420
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || || || || ||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881
|| ||| ||||||| || || || ||||| |||||| | | | ||| || || |
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCA--CTCTCAGCGACTACA 44650
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|||| || ||||| ||||| || ||| ||||| | || | || || |||
Sbjct 44649 ACATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGC 44600
>seq2315
Length=136826
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 44480
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 44479 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 44420
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 92228 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 92287
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 92288 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 92347
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 92348 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 92407
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 92408 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 92455
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 44600
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 92000 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 92059
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 92060 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 92119
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 92120 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 92179
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 92180 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 92227
>seq2223
Length=69470
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 44599 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 44540
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 44539 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 44480
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 44479 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 44420
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 44419 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 44600
>seq1971
Length=47716
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 27211 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 27270
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 27271 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 27330
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 27331 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 27390
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 27391 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 27210
>seq1718
Length=45196
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 27211 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 27270
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 27271 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 27330
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 27331 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 27390
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 27391 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 27210
>seq819
Length=68040
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || ||||||||||| || ||| | ||
Sbjct 23442 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCC 23501
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 23502 GACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 23561
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||| |||||||| | | | || ||||| |||
Sbjct 23562 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAAC 23621
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||||||| ||||| || |||||||| | || |||| || |||
Sbjct 23622 ATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 23669
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||||| | || || || | ||
Sbjct 23214 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 23273
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 23274 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 23333
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| || || || ||||||||||| || | |||| || || |||
Sbjct 23334 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 23393
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 23394 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTTCGTCTCCGTGGTGGC 23441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449880385793080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |