Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2315 86.0 5e-12 seq2223 86.0 5e-12 seq1971 86.0 5e-12 seq1860 86.0 5e-12 seq1718 86.0 5e-12 seq819 86.0 5e-12 >seq2315 Length=136826 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 44618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 92000 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 92059 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 92060 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 92119 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 92120 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 92179 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 92180 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 92209 >seq2223 Length=69470 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 44618 >seq1971 Length=47716 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 27192 >seq1860 Length=12670 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/110 (78%), Gaps = 4/110 (4%) Strand=Plus/Plus Query 34524 CATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATG 34581 || |||||||||||| |||||||||||||||||||| || |||| ||||| ||||| Sbjct 6981 CAGGTTGACGATGACGGTCTTGATGCCGTTGCCCTTGCCCTCGATCTTGGACTGCAGA-- 7038 Query 34582 CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTT 34631 ||| ||| ||||| |||||||| | || | |||| |||| ||||| Sbjct 7039 CGCTCCATCTTGTAACGGTAGAAGGGATCGGTGACATCGCGGCGGACGTT 7088 >seq1718 Length=45196 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 27192 >seq819 Length=68040 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| |||||||| | || ||| | | Sbjct 23214 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 23273 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || ||| | ||| ||| || Sbjct 23274 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 23333 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||||||||| | ||| || || | || |||||| Sbjct 23334 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 23393 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || ||||| ||||| Sbjct 23394 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 23423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412826198557073