Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 100 2e-16
seq2223 100 2e-16
seq1971 100 2e-16
seq1718 100 2e-16
seq819 100 2e-16
>seq2315
Length=136826
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 44618
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 92000 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 92059
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 92060 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 92119
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 92120 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 92179
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 92180 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 92209
>seq2223
Length=69470
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 44648
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 44647 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 44618
>seq1971
Length=47716
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 27192
>seq1718
Length=45196
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 26983 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 27042
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 27043 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 27102
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 27103 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 27162
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 27163 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 27192
>seq819
Length=68040
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| | || ||| | |
Sbjct 23214 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 23273
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || |||||| || || || ||| | ||| ||| |||
Sbjct 23274 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 23333
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||||| || ||||||||||||| || || || | |||||||||
Sbjct 23334 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCAGGACTCTGTCCGACTACAAC 23393
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 23394 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 23423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398861919527029
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |