Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 91.5 3e-13
seq2223 91.5 3e-13
seq1971 91.5 3e-13
seq1718 91.5 3e-13
seq819 91.5 3e-13
>seq2315
Length=136826
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 44584 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 44525
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 44524 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 44465
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 44464 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 44405
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 44404 ACTCTCCACTTGGTT 44390
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 92243 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 92302
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 92303 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 92362
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 92363 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 92422
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 92423 ACTCTCCACTTGGTT 92437
>seq2223
Length=69470
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 44584 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 44525
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 44524 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 44465
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 44464 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 44405
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 44404 ACTCTCCACTTGGTT 44390
>seq1971
Length=47716
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 27226 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 27285
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 27286 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 27345
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 27346 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 27405
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 27406 ACTCTCCACTTGGTT 27420
>seq1718
Length=45196
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 27226 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 27285
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 27286 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 27345
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 27346 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 27405
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 27406 ACTCTCCACTTGGTT 27420
>seq819
Length=68040
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || ||||| || | || |||||| ||| ||||| ||||
Sbjct 23457 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 23516
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || | || ||||||
Sbjct 23517 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 23576
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| ||||| | || | | ||||||||| |||| || |||||
Sbjct 23577 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 23636
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||| | |||
Sbjct 23637 ACTCTCCACTTGGTT 23651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181774450096181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |