Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2315 91.5 3e-13 seq2223 91.5 3e-13 seq1971 91.5 3e-13 seq1718 91.5 3e-13 seq819 91.5 3e-13 >seq2315 Length=136826 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 44584 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 44525 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 44524 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 44465 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 44464 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 44405 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 44404 ACTCTCCACTTGGTT 44390 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 92243 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 92302 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 92303 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 92362 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 92363 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 92422 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 92423 ACTCTCCACTTGGTT 92437 >seq2223 Length=69470 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 44584 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 44525 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 44524 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 44465 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 44464 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 44405 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 44404 ACTCTCCACTTGGTT 44390 >seq1971 Length=47716 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 27226 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 27285 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 27286 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 27345 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 27346 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 27405 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 27406 ACTCTCCACTTGGTT 27420 >seq1718 Length=45196 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 27226 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 27285 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 27286 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 27345 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 27346 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 27405 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 27406 ACTCTCCACTTGGTT 27420 >seq819 Length=68040 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||| || | || |||||| ||| ||||| |||| Sbjct 23457 AAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTCCGACACCATCGATAAC 23516 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | || |||||| Sbjct 23517 GTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 23576 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||||||||| ||||| | || | | ||||||||| |||| || ||||| Sbjct 23577 GCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAACATCCAAAAGGAGTCG 23636 Query 206365 ACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 23637 ACTCTCCACTTGGTT 23651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181774450096181