Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq95 116 4e-21 >seq95 Length=22970 Score = 116 bits (128), Expect = 4e-21 Identities = 350/546 (64%), Gaps = 61/546 (11%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||| ||| | ||||| | || ||||||| |||||| ||||||||||| |||| ||||| Sbjct 9402 CCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGT 9343 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 || | ||||| | || || || ||||||| ||||| |||||||| | || Sbjct 9342 GCGTGAGTGTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGT 9283 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTG-- 147083 | || ||||||||||| || |||| ||||||||| | |||| |||||| ||| | Sbjct 9282 ACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGCAGAC 9223 Query 147084 ------GCACGA-GAGCTCC------------------------CCG------------- 147099 ||||| | ||||| ||| Sbjct 9222 AGTGCAGCACGCCGCGCTCCTTCTCCTGCCTCTCCTGCTCTTCGCCGCTTTCTCCCCTCT 9163 Query 147100 TCGGCCACGTAAAACTGGCACAGGA-----------TGTGGCACGGCGGCAGCGCCATGG 147148 ||| | || ||| ||| || || | ||||||| || ||||| ||||| Sbjct 9162 TCGCGCGCGGAAAGCTGACATAGAACTGCGCGAACATGTGGCAAGGTGGCAGAGCCATCT 9103 Query 147149 CGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTC 147207 ||||||||| || ||||| || | | | || | | || | || || || Sbjct 9102 TCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGATGCGGC-GATCGTACGGCTTGTTC 9044 Query 147208 TTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-C 147266 |||| || ||||| || | |||||| ||||| || || |||| ||||| ||| | Sbjct 9043 TTAAGCTTGTCGATCACGTCCGCCAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTC 8984 Query 147267 GCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC 147326 || |||||||||| || || ||||||| ||||||||||||||| || || || ||||| Sbjct 8983 GC-GTCCACGTACTCAGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTC 8925 Query 147327 GCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTC 147386 ||| || | |||||||| ||| | | | ||| |||||| | || |||| | || Sbjct 8924 GCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGGAACTCGCGCGATCCGTTACCATC 8865 Query 147387 CCAGAT 147392 |||||| Sbjct 8864 CCAGAT 8859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583465674290400