Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq95 116 4e-21
>seq95
Length=22970
Score = 116 bits (128), Expect = 4e-21
Identities = 350/546 (64%), Gaps = 61/546 (11%)
Strand=Plus/Minus
Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965
||| ||| | ||||| | || ||||||| |||||| ||||||||||| |||| |||||
Sbjct 9402 CCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGT 9343
Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025
|| | ||||| | || || || ||||||| ||||| |||||||| | ||
Sbjct 9342 GCGTGAGTGTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGT 9283
Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTG-- 147083
| || ||||||||||| || |||| ||||||||| | |||| |||||| ||| |
Sbjct 9282 ACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGCAGAC 9223
Query 147084 ------GCACGA-GAGCTCC------------------------CCG------------- 147099
||||| | ||||| |||
Sbjct 9222 AGTGCAGCACGCCGCGCTCCTTCTCCTGCCTCTCCTGCTCTTCGCCGCTTTCTCCCCTCT 9163
Query 147100 TCGGCCACGTAAAACTGGCACAGGA-----------TGTGGCACGGCGGCAGCGCCATGG 147148
||| | || ||| ||| || || | ||||||| || ||||| |||||
Sbjct 9162 TCGCGCGCGGAAAGCTGACATAGAACTGCGCGAACATGTGGCAAGGTGGCAGAGCCATCT 9103
Query 147149 CGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTC 147207
||||||||| || ||||| || | | | || | | || | || || ||
Sbjct 9102 TCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGATGCGGC-GATCGTACGGCTTGTTC 9044
Query 147208 TTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-C 147266
|||| || ||||| || | |||||| ||||| || || |||| ||||| ||| |
Sbjct 9043 TTAAGCTTGTCGATCACGTCCGCCAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTC 8984
Query 147267 GCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC 147326
|| |||||||||| || || ||||||| ||||||||||||||| || || || |||||
Sbjct 8983 GC-GTCCACGTACTCAGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTC 8925
Query 147327 GCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTC 147386
||| || | |||||||| ||| | | | ||| |||||| | || |||| | ||
Sbjct 8924 GCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGGAACTCGCGCGATCCGTTACCATC 8865
Query 147387 CCAGAT 147392
||||||
Sbjct 8864 CCAGAT 8859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583465674290400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |