Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2671 84.2 2e-11
seq2418 84.2 2e-11
seq2239 84.2 2e-11
seq916 84.2 2e-11
seq914 84.2 2e-11
seq394 84.2 2e-11
>seq2671
Length=83953
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Plus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 64181 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 64240
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 64241 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 64299
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 64300 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 64359
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 64360 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 64419
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 64420 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 64470
>seq2418
Length=103160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484
>seq2239
Length=73789
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484
>seq916
Length=96998
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484
>seq914
Length=103160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484
>seq394
Length=46427
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Plus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 26655 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 26714
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 26715 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 26773
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 26774 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 26833
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 26834 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 26893
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 26894 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 26944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397441172531305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |