Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2671 84.2 2e-11 seq2418 84.2 2e-11 seq2239 84.2 2e-11 seq916 84.2 2e-11 seq914 84.2 2e-11 seq394 84.2 2e-11 >seq2671 Length=83953 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 64181 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 64240 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 64241 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 64299 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 64300 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 64359 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 64360 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 64419 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 64420 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 64470 >seq2418 Length=103160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484 >seq2239 Length=73789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484 >seq916 Length=96998 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484 >seq914 Length=103160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 19773 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 19714 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 19713 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 19655 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 19654 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 19595 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 19594 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 19535 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 19534 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 19484 >seq394 Length=46427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 195/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || | || ||||||||| | || || |||| ||| ||||| ||||||||||| Sbjct 26655 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 26714 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547 | || | ||||| || || || | ||||| || | |||||| | | || Sbjct 26715 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 26773 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 | | || || || || | ||||| |||| || | || ||||| ||||| | Sbjct 26774 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 26833 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||| | ||| ||||| ||||| ||||| || | ||||| Sbjct 26834 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 26893 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 ||| | ||| |||| ||| | | | ||||||||||| ||| || |||| Sbjct 26894 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 26944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441172531305