Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2803 95.1 1e-14 seq1977 95.1 1e-14 seq2315 82.4 6e-11 seq2223 82.4 6e-11 seq1971 82.4 6e-11 seq1718 82.4 6e-11 seq911 82.4 6e-11 seq819 82.4 6e-11 >seq2803 Length=29324 Score = 95.1 bits (104), Expect = 1e-14 Identities = 280/431 (65%), Gaps = 3/431 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| | || ||||| || | ||| ||||||||| ||||| |||||||| || Sbjct 1884 GGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAG 1943 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| | ||||| || || || | ||| ||| ||| | || Sbjct 1944 AGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGG 2003 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | || | | | |||| || | || |||||||| || || | || | || Sbjct 2004 TTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCG 2063 Query 131783 ATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | || || |||||| ||| || || | ||| | || | |||||||||| || Sbjct 2064 AAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACA 2123 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 || | ||| || | |||||| | | || || || | ||||||||||||| || Sbjct 2124 CGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTG 2183 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959 || | ||| ||||||||| || || ||||| ||| || || ||||| | || || Sbjct 2184 GCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAG 2243 Query 131960 TTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAA 132019 | | || |||| |||||||| || | ||| ||| | ||||||| | |||||| Sbjct 2244 GTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAA 2303 Query 132020 GAGGACAACTG 132030 || | |||||| Sbjct 2304 GAAGCCAACTG 2314 >seq1977 Length=29324 Score = 95.1 bits (104), Expect = 1e-14 Identities = 280/431 (65%), Gaps = 3/431 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| | || ||||| || | ||| ||||||||| ||||| |||||||| || Sbjct 1884 GGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAG 1943 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| | ||||| || || || | ||| ||| ||| | || Sbjct 1944 AGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGG 2003 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | || | | | |||| || | || |||||||| || || | || | || Sbjct 2004 TTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCG 2063 Query 131783 ATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | || || |||||| ||| || || | ||| | || | |||||||||| || Sbjct 2064 AAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACA 2123 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 || | ||| || | |||||| | | || || || | ||||||||||||| || Sbjct 2124 CGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTG 2183 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959 || | ||| ||||||||| || || ||||| ||| || || ||||| | || || Sbjct 2184 GCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAG 2243 Query 131960 TTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAA 132019 | | || |||| |||||||| || | ||| ||| | ||||||| | |||||| Sbjct 2244 GTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAA 2303 Query 132020 GAGGACAACTG 132030 || | |||||| Sbjct 2304 GAAGCCAACTG 2314 >seq2315 Length=136826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 44372 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 44431 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 44432 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 44491 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 44492 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 44551 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 44552 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 44599 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 92455 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 92396 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 92395 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 92336 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 92335 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 92276 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 92275 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 92228 >seq2223 Length=69470 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 44372 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 44431 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 44432 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 44491 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 44492 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 44551 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 44552 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 44599 >seq1971 Length=47716 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 27438 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 27379 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 27378 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 27319 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 27318 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 27259 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 27258 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 27211 >seq1718 Length=45196 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 27438 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 27379 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 27378 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 27319 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 27318 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 27259 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 27258 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 27211 >seq911 Length=71809 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||||| | |||| | || |||||||| || || Sbjct 44631 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGCTTGCCC 44690 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || ||||| || | ||||| || || ||||||| | || Sbjct 44691 GCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTG 44750 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | ||||| || | || || | ||||| || || || Sbjct 44751 ACGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCTTGCCGGTGAGCGTC 44810 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 44811 TTGACGAAGATCTGCATA 44828 >seq819 Length=68040 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || ||||| || ||||| || Sbjct 23669 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 23610 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || | ||| ||||| ||| | ||||||||||| || ||||| || Sbjct 23609 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 23550 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || |||||| |||| | | || | ||||| | | ||| || Sbjct 23549 GATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCAC 23490 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || || ||||| ||||| Sbjct 23489 CTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 23442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424918547423832