Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1971 114 4e-20
seq1718 114 4e-20
seq911 114 4e-20
seq2315 100 9e-16
seq2223 100 9e-16
seq819 100 9e-16
>seq1971
Length=47716
Score = 114 bits (126), Expect = 4e-20
Identities = 263/395 (67%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| || || ||||| || ||||| | || |||| ||| | ||| || | || |
Sbjct 8538 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 8597
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|||| || || | | ||||| | ||||| || ||||| || || || | ||||||
Sbjct 8598 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 8657
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| || |||||| || | || || || | || || || ||
Sbjct 8658 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 8717
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768
||||| ||||| || || || || || ||||| || | | | || | || ||
Sbjct 8718 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 8774
Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828
| || || || ||| | |||||||||||||| ||||| || || || || | || |||
Sbjct 8775 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAG 8834
Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| || || || || || | || || ||||| || || |||||||| || || || ||
Sbjct 8835 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 8894
Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
|| || || ||| || || || || ||||| ||
Sbjct 8895 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 8929
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 26706 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 26647
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 26646 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 26587
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 26586 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 26528
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 26527 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496
>seq1718
Length=45196
Score = 114 bits (126), Expect = 4e-20
Identities = 263/395 (67%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| || || ||||| || ||||| | || |||| ||| | ||| || | || |
Sbjct 8538 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 8597
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|||| || || | | ||||| | ||||| || ||||| || || || | ||||||
Sbjct 8598 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 8657
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| || |||||| || | || || || | || || || ||
Sbjct 8658 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 8717
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768
||||| ||||| || || || || || ||||| || | | | || | || ||
Sbjct 8718 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 8774
Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828
| || || || ||| | |||||||||||||| ||||| || || || || | || |||
Sbjct 8775 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAG 8834
Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| || || || || || | || || ||||| || || |||||||| || || || ||
Sbjct 8835 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 8894
Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
|| || || ||| || || || || ||||| ||
Sbjct 8895 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 8929
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 26706 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 26647
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 26646 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 26587
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 26586 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 26528
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 26527 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496
>seq911
Length=71809
Score = 114 bits (126), Expect = 4e-20
Identities = 263/395 (67%), Gaps = 6/395 (2%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| || || ||||| || ||||| | || |||| ||| | ||| || | || |
Sbjct 63272 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 63213
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|||| || || | | ||||| | ||||| || ||||| || || || | ||||||
Sbjct 63212 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 63153
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| || |||||| || | || || || | || || || ||
Sbjct 63152 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 63093
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768
||||| ||||| || || || || || ||||| || | | | || | || ||
Sbjct 63092 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 63036
Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828
| || || || ||| | |||||||||||||| ||||| || || || || | || |||
Sbjct 63035 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCCCTTCTGACTATCGAGGAG 62976
Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| | || || || || || || || ||||| || || |||||||| || || || ||
Sbjct 62975 GGTGTCTTCGAGGTCAAGGCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 62916
Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
|| || || ||| || || || || ||||| ||
Sbjct 62915 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 62881
>seq2315
Length=136826
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 45104 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 45163
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 45164 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 45223
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 45224 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 45282
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 45283 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 91723 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 91664
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 91663 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 91604
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 91603 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 91545
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 91544 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 91513
>seq2223
Length=69470
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 45104 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 45163
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 45164 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 45223
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 45224 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 45282
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 45283 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314
Score = 96.9 bits (106), Expect = 1e-14
Identities = 213/318 (67%), Gaps = 5/318 (2%)
Strand=Plus/Minus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|| ||| | ||||| || ||||| || || || || ||| | | || || || || ||
Sbjct 63197 GCCGTTGTCACTGTTCCCGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 63138
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| | |||||| || | ||||| || | | | || || ||||| || || || |
Sbjct 63137 GGTACCATTGCCGGTCTGAATGTCCTCCGTGTTGTCAACGAGCCCACCGCGGCCGCTCTG 63078
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaa----aTATTCTTATTTTTGATTT 349785
|| || || || || || | | |||| |||| || | || || | | ||| |
Sbjct 63077 GCCTACGGTCTGGACAAGAAGGATGAC-AAGACTGAACGCCAGATCATTGTCTACGATCT 63019
Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845
|||||||||||||| ||||| || || || || | || ||||| | || || || ||
Sbjct 63018 TGGTGGTGGTACTTTCGATGTCTCCCTTCTGACTATCGAGGAGGGTGTCTTCGAGGTCAA 62959
Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905
|| || || ||||| || || |||||||| || || || || || || || ||| ||
Sbjct 62958 GGCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGACAACCGCCTTGTTAACCA 62899
Query 349906 TTTTGTTAAAGAATTTAA 349923
|| || || ||||| ||
Sbjct 62898 CTTCGTCAATGAATTCAA 62881
>seq819
Length=68040
Score = 100 bits (110), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || ||||| || ||||| || || || || |
Sbjct 22937 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 22878
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 22877 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 22818
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || ||||| ||||| || ||||| || || ||| || || || || || | || ||
Sbjct 22817 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 22759
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || || | ||||| |||||
Sbjct 22758 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 22727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515194973142983
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