Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1971 114 4e-20 seq1718 114 4e-20 seq911 114 4e-20 seq2315 100 9e-16 seq2223 100 9e-16 seq819 100 9e-16 >seq1971 Length=47716 Score = 114 bits (126), Expect = 4e-20 Identities = 263/395 (67%), Gaps = 6/395 (2%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || ||||| || ||||| | || |||| ||| | ||| || | || | Sbjct 8538 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 8597 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| | ||||| || ||||| || || || | |||||| Sbjct 8598 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 8657 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || |||||| || | || || || | || || || || Sbjct 8658 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 8717 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768 ||||| ||||| || || || || || ||||| || | | | || | || || Sbjct 8718 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 8774 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || || ||| | |||||||||||||| ||||| || || || || | || ||| Sbjct 8775 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAG 8834 Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || || || || || | || || ||||| || || |||||||| || || || || Sbjct 8835 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 8894 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 || || || ||| || || || || ||||| || Sbjct 8895 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 8929 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 26706 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 26647 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 26646 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 26587 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 26586 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 26528 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 26527 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496 >seq1718 Length=45196 Score = 114 bits (126), Expect = 4e-20 Identities = 263/395 (67%), Gaps = 6/395 (2%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || ||||| || ||||| | || |||| ||| | ||| || | || | Sbjct 8538 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 8597 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| | ||||| || ||||| || || || | |||||| Sbjct 8598 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 8657 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || |||||| || | || || || | || || || || Sbjct 8658 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 8717 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768 ||||| ||||| || || || || || ||||| || | | | || | || || Sbjct 8718 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 8774 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || || ||| | |||||||||||||| ||||| || || || || | || ||| Sbjct 8775 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAG 8834 Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || || || || || | || || ||||| || || |||||||| || || || || Sbjct 8835 GGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 8894 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 || || || ||| || || || || ||||| || Sbjct 8895 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 8929 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 26706 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 26647 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 26646 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 26587 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 26586 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 26528 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 26527 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 26496 >seq911 Length=71809 Score = 114 bits (126), Expect = 4e-20 Identities = 263/395 (67%), Gaps = 6/395 (2%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || ||||| || ||||| | || |||| ||| | ||| || | || | Sbjct 63272 CCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTC 63213 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| | ||||| || ||||| || || || | |||||| Sbjct 63212 GGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGT 63153 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || |||||| || | || || || | || || || || Sbjct 63152 CAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAG 63093 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaaT 349768 ||||| ||||| || || || || || ||||| || | | | || | || || Sbjct 63092 CCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAAGGCCACTGGC---GAGCGCAAC 63036 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || || ||| | |||||||||||||| ||||| || || || || | || ||| Sbjct 63035 GTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCCCTTCTGACTATCGAGGAG 62976 Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || | || || || || || || || ||||| || || |||||||| || || || || Sbjct 62975 GGTGTCTTCGAGGTCAAGGCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGAC 62916 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 || || || ||| || || || || ||||| || Sbjct 62915 AACCGCCTTGTTAACCACTTCGTCAATGAATTCAA 62881 >seq2315 Length=136826 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 45104 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 45163 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 45164 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 45223 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 45224 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 45282 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 45283 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 91723 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 91664 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 91663 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 91604 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 91603 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 91545 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 91544 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 91513 >seq2223 Length=69470 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 45104 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 45163 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 45164 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 45223 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 45224 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 45282 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 45283 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 45314 Score = 96.9 bits (106), Expect = 1e-14 Identities = 213/318 (67%), Gaps = 5/318 (2%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || ||| | ||||| || ||||| || || || || ||| | | || || || || || Sbjct 63197 GCCGTTGTCACTGTTCCCGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 63138 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | |||||| || | ||||| || | | | || || ||||| || || || | Sbjct 63137 GGTACCATTGCCGGTCTGAATGTCCTCCGTGTTGTCAACGAGCCCACCGCGGCCGCTCTG 63078 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaa----aTATTCTTATTTTTGATTT 349785 || || || || || || | | |||| |||| || | || || | | ||| | Sbjct 63077 GCCTACGGTCTGGACAAGAAGGATGAC-AAGACTGAACGCCAGATCATTGTCTACGATCT 63019 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || || | || ||||| | || || || || Sbjct 63018 TGGTGGTGGTACTTTCGATGTCTCCCTTCTGACTATCGAGGAGGGTGTCTTCGAGGTCAA 62959 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || || || ||||| || || |||||||| || || || || || || || ||| || Sbjct 62958 GGCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTCGACAACCGCCTTGTTAACCA 62899 Query 349906 TTTTGTTAAAGAATTTAA 349923 || || || ||||| || Sbjct 62898 CTTCGTCAATGAATTCAA 62881 >seq819 Length=68040 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| || ||||| || || || || | Sbjct 22937 TTTGCATACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGT 22878 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || ||||| ||||| || || ||||||| Sbjct 22877 AGTCGCTGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGAT 22818 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | || ||||| ||||| || ||||| || || ||| || || || || || | || || Sbjct 22817 CCGGGGGAATGCCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAC 22759 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || || | ||||| ||||| Sbjct 22758 GACTCGACCTCGAGGGTGATGGTCTTGCCGGT 22727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515194973142983