Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq95 138 9e-28
>seq95
Length=22970
Score = 138 bits (152), Expect = 9e-28
Identities = 449/706 (64%), Gaps = 61/706 (9%)
Strand=Plus/Minus
Query 29814 CCACCCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 29869
||||||| |||||| || ||| ||||||| || ||||||| ||| | |||
Sbjct 9454 CCACCCTTTTCCCTGTTGATAGATAGTTCGGGAAAGTCCCTTGGCTCCCGCTCCAACTGC 9395
Query 29870 GTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAAC 29929
|||||| | || |||| || ||||| ||||| ||||| |||| | |||| |
Sbjct 9394 ACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGTGCGTGAGT 9335
Query 29930 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29989
|||||| || || ||| || |||| ||||| |||||| |||| ||| ||
Sbjct 9334 GTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGTACGAAGCA 9275
Query 29990 ATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA------- 30042
||||| ||||| || || | |||||||| | |||| |||||||||| ||||
Sbjct 9274 ATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGCAGACAGTGCAGC 9215
Query 30043 ----CGAGA-------------------GCTCTCCGTCGCT----------------CAC 30063
|| | ||||| || |||| | |
Sbjct 9214 ACGCCGCGCTCCTTCTCCTGCCTCTCCTGCTCTTCGCCGCTTTCTCCCCTCTTCGCGCGC 9155
Query 30064 GTAAAACTGACACA----TG-GCG------TGGCACGGAGGAAGAGCCATGAGGCCCAAG 30112
| ||| |||||| | || ||| ||||| || || |||||||| || |
Sbjct 9154 GGAAAGCTGACATAGAACTGCGCGAACATGTGGCAAGGTGGCAGAGCCATCTTCTTCAGG 9095
Query 30113 TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGG 30172
|| || ||||| |||| || ||||||||| | || | || |||||| | | |
Sbjct 9094 TCCGCCGGATTCCACGCGCTCATGATGATGCGGCGATCGTACGGCTTGTTCTTAAGCTTG 9035
Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 30232
|| | ||| |||||||||||| || ||| |||||| | | || |||| |
Sbjct 9034 TCGATCACGTCCGCCAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACG 8975
Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292
||||| || ||||| |||| ||||||||| ||||| || || || ||||| ||||| ||
Sbjct 8974 TACTCAGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCG 8915
Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352
| |||| || ||| |||| | || || | || ||||| | |||||||||||
Sbjct 8914 CGGTGCGAGAGGCCGACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTG 8855
Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30412
|| || ||| ||||| || || |||| ||| ||| |||||||| || ||
Sbjct 8854 ACGCCAGCCTCGGAGAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCG 8795
Query 30413 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458
| | |||||| | ||||| | |||||| |||||||| ||||
Sbjct 8794 GCTATGACGGCGCGCAGGAAGACGCGCTTGGTGGTGAGGAGCGGAA 8749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406295242209612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |