Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2315 96.9 2e-15 seq2223 96.9 2e-15 seq1971 96.9 2e-15 seq1718 96.9 2e-15 seq911 96.9 2e-15 seq819 96.9 2e-15 >seq2315 Length=136826 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 44372 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 44431 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 44432 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 44491 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 44492 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 44550 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 44551 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 44600 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 92455 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 92396 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 92395 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 92336 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 92335 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 92277 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 92276 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 92227 >seq2223 Length=69470 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 44372 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 44431 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 44432 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 44491 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 44492 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 44550 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 44551 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 44600 >seq1971 Length=47716 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 27438 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 27379 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 27378 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 27319 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 27318 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 27260 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 27259 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 27210 >seq1718 Length=45196 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 27438 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 27379 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 27378 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 27319 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 27318 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 27260 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 27259 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 27210 >seq911 Length=71809 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 44372 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 44431 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || || || || || || || | |||||| |||||||| || Sbjct 44432 GAGCGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 44491 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 44492 GATGCCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 44550 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 44551 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 44600 >seq819 Length=68040 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||||| |||||||| ||||||||| ||||| ||||| || Sbjct 23669 GCCGCCACGCAGACGAAGAACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGA 23610 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || | || ||||| || || || | |||||| |||||||| || Sbjct 23609 GAGCGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 23550 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| || || ||||| |||| Sbjct 23549 GATACCCTCCTTGTCCTGGATC-TTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCA 23491 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || ||||| || || || | || || || || ||||||||| Sbjct 23490 CCTCGAGCGTAATCGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 23441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314717858717213