Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 125 6e-24
seq2223 125 6e-24
seq1971 125 6e-24
seq1718 125 6e-24
seq911 125 6e-24
seq819 125 6e-24
seq2536 89.7 4e-13
>seq2315
Length=136826
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 44481
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 44480 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 44421
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 92227 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 92286
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 92287 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 92346
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 92347 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 92406
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 92407 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 92455
>seq2223
Length=69470
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 44481
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 44480 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 44421
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
>seq1971
Length=47716
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 27210 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 27269
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 27270 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 27329
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 27330 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 27389
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 27390 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438
>seq1718
Length=45196
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 27210 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 27269
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 27270 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 27329
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 27330 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 27389
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 27390 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438
>seq911
Length=71809
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || ||||| || || || ||
Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 44481
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| ||||| || | || || || || | || ||||||||
Sbjct 44480 GCAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCTGATTACAA 44421
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | ||||| | || || || |||||
Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || || || ||||| || ||||| || || || ||
Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || | || || | || | ||| ||||||
Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAAC 44648
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||| | ||| | || ||||||||
Sbjct 44647 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGCAT 44598
>seq819
Length=68040
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || |||||| | ||||| || || |||||| | ||
Sbjct 23441 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 23500
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || ||||| || || || || || || ||
Sbjct 23501 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 23560
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || ||||| || || || | || ||||||||
Sbjct 23561 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 23620
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| |||||||||||||| | || |||||| | ||| |||| || |||
Sbjct 23621 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 23669
>seq2536
Length=61238
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|||||||||||| || || || || || || |||||| | || || || || || || |
Sbjct 20420 CGCCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTC 20479
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
|| ||| | || || | ||||| || ||||| ||||| || ||||| || || ||
Sbjct 20480 TTCGGACACCATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCCCCGGA 20539
Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163
|| ||||| | || | ||||||||| || | || || | ||| | ||||| ||
Sbjct 20540 CCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTA 20599
Query 27164 CAACATTCAAAAGG 27177
|||||| || ||||
Sbjct 20600 CAACATCCAGAAGG 20613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434901758934720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |