Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2315 125 6e-24 seq2223 125 6e-24 seq1971 125 6e-24 seq1718 125 6e-24 seq911 125 6e-24 seq819 125 6e-24 seq2536 89.7 4e-13 >seq2315 Length=136826 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 44481 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 44480 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 44421 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 92227 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 92286 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 92287 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 92346 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 92347 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 92406 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 92407 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 92455 >seq2223 Length=69470 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 44481 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 44480 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 44421 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 >seq1971 Length=47716 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 27210 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 27269 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 27270 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 27329 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 27330 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 27389 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 27390 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438 >seq1718 Length=45196 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 27210 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 27269 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 27270 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 27329 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 27330 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 27389 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 27390 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 27438 >seq911 Length=71809 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 44600 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 44541 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || ||||| || || || || Sbjct 44540 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 44481 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| ||||| || | || || || || | || |||||||| Sbjct 44480 GCAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCTGATTACAA 44421 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 44420 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 44372 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | ||||| | || || || ||||| Sbjct 44827 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATTACATTGGAGGTTGAGTCGTCC 44768 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || ||||| || || || || Sbjct 44767 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 44708 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || || | || | ||| |||||| Sbjct 44707 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCAGCGACTACAAC 44648 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || |||| | ||| | || |||||||| Sbjct 44647 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGCAT 44598 >seq819 Length=68040 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | ||||| || || |||||| | || Sbjct 23441 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATTACGCTCGAGGTGGAATCTTC 23500 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || || || || || || || Sbjct 23501 CGACACCATCGATAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 23560 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || ||||| || || || | || |||||||| Sbjct 23561 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACGCTCTCTGATTACAA 23620 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| |||||||||||||| | || |||||| | ||| |||| || ||| Sbjct 23621 CATCCAAAAGGAGTCGACTCTCCACTTGGTTCTTCGTCTGCGTGGCGGC 23669 >seq2536 Length=61238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 |||||||||||| || || || || || || |||||| | || || || || || || | Sbjct 20420 CGCCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTC 20479 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | || || | ||||| || ||||| ||||| || ||||| || || || Sbjct 20480 TTCGGACACCATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCCCCGGA 20539 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||||| | || | ||||||||| || | || || | ||| | ||||| || Sbjct 20540 CCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTA 20599 Query 27164 CAACATTCAAAAGG 27177 |||||| || |||| Sbjct 20600 CAACATCCAGAAGG 20613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434901758934720