Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq95 125 6e-24
>seq95
Length=22970
Score = 125 bits (138), Expect = 6e-24
Identities = 196/278 (71%), Gaps = 2/278 (1%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| || ||||||||||| | | |||| || || || || || |||| || || |
Sbjct 8850 GGCGTCAAGATCTGGGATGGTAACGGATCGCGCGAGTTCCTCGACAGTGTCGGCCTCTCG 8909
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
|| |||||||||||| | ||||| |||||||| ||||||||| | ||||| || ||
Sbjct 8910 CACCGCGAGGAGGGCGACCTAGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTCGGCGCT 8969
Query 34442 GAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGT 34500
||||| || || |||| | ||||||| |||||| || | ||| |||||| | ||||
Sbjct 8970 GAGTA-CGTGGACGCGACGACGGACTACAGGGGACAAGGTGTGGATCAGCTGGCGGACGT 9028
Query 34501 GATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560
|||||||| | ||| || || | || | | ||| | ||| |||||||||| ||
Sbjct 9029 GATCGACAAGCTTAAGAACAAGCCGTACGATCGCCGCATCATCATGAGCGCGTGGAATCC 9088
Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598
| ||| || |||||| || || || |||||||
Sbjct 9089 GGCGGACCTGAAGAAGATGGCTCTGCCACCTTGCCACA 9126
Score = 125 bits (138), Expect = 6e-24
Identities = 196/278 (71%), Gaps = 2/278 (1%)
Strand=Plus/Minus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
||||||| || || || |||||| || ||| ||| |||||||||| ||| | ||
Sbjct 9126 TGTGGCAAGGTGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGA 9067
Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866
| | | || | || || ||| | |||||||||||| | |||||| ||| | |
Sbjct 9066 TGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACGTCCGCCAGCTGATCCACAC 9007
Query 6867 CCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925
| |||||| ||||||| | |||| || || ||||| || || ||||| | |||||||
Sbjct 9006 CTTGTCCCCTGTAGTCCGTCGTCGCGTCCACG-TACTCAGCGCCGAAGTGCCGCCACTGG 8948
Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGA 6985
|| |||||||| ||||| | |||||||||||| || | || || |||| ||
Sbjct 8947 AAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGG 8888
Query 6986 AAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
|| || || || |||| | | ||||||||||| || ||
Sbjct 8887 AACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCC 8850
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 34630 GCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACAT 34689
|||| ||| | |||||| || || || | |||||||| || || || || ||||||||
Sbjct 9215 GCTGCACTGTCTGCTCTACCAGCGGTCCTGTGACATGGGCTTGGGCGTTCCCTTCAACAT 9274
Query 34690 TGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
|||| ||||||||||||||| ||||| | || ||||||
Sbjct 9275 TGCTTCGTACGCTCTGCTCACGCACATGTTGGCCCATGTC 9314
Score = 82.4 bits (90), Expect = 7e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
|||||| || | ||||| ||||||||||||||| |||||||||||| || || || ||
Sbjct 9314 GACATGGGCCAACATGTGCGTGAGCAGAGCGTACGAAGCAATGTTGAAGGGAACGCCCAA 9255
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGC 6715
|||||||| | || || || |||||| | ||| ||||
Sbjct 9254 GCCCATGTCACAGGACCGCTGGTAGAGCAGACAGTGCAGC 9215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448245248359920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |