Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07- 09] 3,061 sequences; 98,695,791 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2315 98.7 9e-16 seq2223 98.7 9e-16 seq1971 98.7 9e-16 seq1718 98.7 9e-16 seq819 98.7 9e-16 seq911 89.7 4e-13 >seq2315 Length=136826 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 44738 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 92209 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 92150 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 92149 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 92090 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 92089 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 92031 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 92030 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 44853 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 44912 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 44913 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 44972 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 44973 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 45031 Query 39261 CA 39262 || Sbjct 45032 CA 45033 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 91974 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 91915 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 91914 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 91855 Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 91854 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 91796 Query 39261 CA 39262 || Sbjct 91795 CA 91794 >seq2223 Length=69470 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 44738 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 44853 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 44912 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 44913 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 44972 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 44973 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 45031 Query 39261 CA 39262 || Sbjct 45032 CA 45033 >seq1971 Length=47716 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 27072 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 27014 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 27013 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 26957 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 26898 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 26897 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 26838 Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 26837 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 26779 Query 39261 CA 39262 || Sbjct 26778 CA 26777 >seq1718 Length=45196 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 27072 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 27014 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 27013 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 26957 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 26898 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 26897 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 26838 Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 26837 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 26779 Query 39261 CA 39262 || Sbjct 26778 CA 26777 >seq819 Length=68040 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || |||| || || | |||| || Sbjct 23423 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 23364 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 23363 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 23304 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 23303 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 23245 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 23244 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || ||| || || || | || || ||||| Sbjct 23188 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 23129 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| || Sbjct 23128 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 23069 Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || ||||||||||| || || | ||||| | || || || Sbjct 23068 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 23010 Query 39261 CA 39262 || Sbjct 23009 CA 23008 >seq911 Length=71809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| ||||| || || ||||| | || || || | || || Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCG 44450 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| | Sbjct 44451 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 44510 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | | | | || ||| || ||||| || | ||| || | || Sbjct 44511 ATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTG 44570 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| ||||| Sbjct 44571 CCAGTGAGGGTCTTAACGAAGATCTGCAT 44599 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || || ||| || || || || || ||| || || || | || || Sbjct 44618 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTC 44677 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| Sbjct 44678 GAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| ||| | | | |||||| |||||| || |||| || || | | Sbjct 44738 GATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| ||||| Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429529575398693