Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 98.7 9e-16
seq2223 98.7 9e-16
seq1971 98.7 9e-16
seq1718 98.7 9e-16
seq819 98.7 9e-16
seq911 89.7 4e-13
>seq2315
Length=136826
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 44738 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 92209 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 92150
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 92149 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 92090
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 92089 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 92031
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 92030 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 92000
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 44853 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 44912
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 44913 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 44972
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 44973 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 45031
Query 39261 CA 39262
||
Sbjct 45032 CA 45033
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 91974 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 91915
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 91914 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 91855
Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 91854 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 91796
Query 39261 CA 39262
||
Sbjct 91795 CA 91794
>seq2223
Length=69470
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 44618 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 44677
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 44678 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 44738 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 44853 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 44912
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 44913 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 44972
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 44973 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 45031
Query 39261 CA 39262
||
Sbjct 45032 CA 45033
>seq1971
Length=47716
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 27072 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 27014
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 27013 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 26957 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 26898
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 26897 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 26838
Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 26837 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 26779
Query 39261 CA 39262
||
Sbjct 26778 CA 26777
>seq1718
Length=45196
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 27192 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 27133
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 27132 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27073
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 27072 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 27014
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 27013 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 26983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 26957 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 26898
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 26897 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 26838
Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 26837 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 26779
Query 39261 CA 39262
||
Sbjct 26778 CA 26777
>seq819
Length=68040
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || ||| ||| || || || || || |||| || || | |||| ||
Sbjct 23423 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCTGCCGTCCTC 23364
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 23363 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 23304
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 23303 AATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 23245
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 23244 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 23214
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||||||||||| || || || || ||| || || || | || || |||||
Sbjct 23188 TGGAGAGTGCTCTCTTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTCGAGCTGC 23129
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||||||||| | ||| | || ||| |||||| ||| ||
Sbjct 23128 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 23069
Query 39202 TGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || ||||||||||| || || | ||||| | || || ||
Sbjct 23068 CTCTTGA-CGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGT 23010
Query 39261 CA 39262
||
Sbjct 23009 CA 23008
>seq911
Length=71809
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || ||| ||||| || || ||||| | || || || | || ||
Sbjct 44391 ACCAAGTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGAGAGCGTGCGACCATCCTCG 44450
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| |||||||| || || |||||||||||||| | ||| | || ||| |||||| |
Sbjct 44451 AGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 44510
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| ||| || | | | | || ||| || ||||| || | ||| || | ||
Sbjct 44511 ATCTTCGACTTCACGTTATCGATGGTGTCGGAAGATTCCACCTCGAGCGTAATCGTCTTG 44570
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || ||||| ||||| |||||
Sbjct 44571 CCAGTGAGGGTCTTAACGAAGATCTGCAT 44599
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||||| || || || ||| || || || || || ||| || || || | || ||
Sbjct 44618 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCCTC 44677
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| |||||||| || || |||||||||||||| | ||| | || ||| ||||||
Sbjct 44678 GAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 44737
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || |||| ||| | | | |||||| |||||| || |||| || || | |
Sbjct 44738 GATCTTGCTCTTGA-CGTTGTCGATGGTATCGGACGACTCAACCTCCAATGTAATGGTCT 44796
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || ||||| |||||
Sbjct 44797 TGCCGGTGAGCGTCTTGACGAAGATCTGCAT 44827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429529575398693
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