Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq95 143 2e-29
>seq95
Length=22970
Score = 143 bits (158), Expect = 2e-29
Identities = 450/706 (64%), Gaps = 61/706 (9%)
Strand=Plus/Minus
Query 27080 CCACCCT----CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 27135
||||||| |||||| || ||| ||||||| || ||||||| ||| | |||
Sbjct 9454 CCACCCTTTTCCCTGTTGATAGATAGTTCGGGAAAGTCCCTTGGCTCCCGCTCCAACTGC 9395
Query 27136 GTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAAC 27195
|||||| | || ||||| || ||||| ||||| ||||| |||| |||||| |
Sbjct 9394 ACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGTGCGTGAGT 9335
Query 27196 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 27255
|||||| || || ||| || |||| ||||| |||||| |||| ||| ||
Sbjct 9334 GTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGTACGAAGCA 9275
Query 27256 ATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA------- 27308
||||| ||||| || || | |||||||| | |||| |||||||||| ||||
Sbjct 9274 ATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGCAGACAGTGCAGC 9215
Query 27309 ----CGAGA-------------------GCTCTCCATCGCTTAC---------------- 27329
|| | ||||| | ||||| |
Sbjct 9214 ACGCCGCGCTCCTTCTCCTGCCTCTCCTGCTCTTCGCCGCTTTCTCCCCTCTTCGCGCGC 9155
Query 27330 GTAAAACTGACATA----TG-GCG------TGGCACGGAGGAAGAGCCATGAGGCCCAAG 27378
| ||| |||||||| || ||| ||||| || || |||||||| || |
Sbjct 9154 GGAAAGCTGACATAGAACTGCGCGAACATGTGGCAAGGTGGCAGAGCCATCTTCTTCAGG 9095
Query 27379 TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGG 27438
|| || ||||| |||| || ||||||||| | || | || |||||| | | |
Sbjct 9094 TCCGCCGGATTCCACGCGCTCATGATGATGCGGCGATCGTACGGCTTGTTCTTAAGCTTG 9035
Query 27439 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG 27498
|| | ||| |||||||||||| || ||| |||||| | || |||| |
Sbjct 9034 TCGATCACGTCCGCCAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACG 8975
Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558
||||| || ||||| |||| ||| ||||| ||||| || || || ||||| ||||| ||
Sbjct 8974 TACTCAGCGCCGAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCG 8915
Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618
| |||| || ||| |||| | || || | || ||||| | |||||||||||
Sbjct 8914 CGGTGCGAGAGGCCGACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTG 8855
Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678
|| || ||||||||| || || |||| ||| ||| |||||||| || ||
Sbjct 8854 ACGCCAGCCTCGGAGAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCG 8795
Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724
| | |||||| | ||||| | |||||| |||||||| ||||
Sbjct 8794 GCTATGACGGCGCGCAGGAAGACGCGCTTGGTGGTGAGGAGCGGAA 8749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369493415187491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |