Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001051165.1_202015-07-
09] 3,061 sequences; 98,695,791 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2803 102 1e-16
seq1977 102 1e-16
>seq2803
Length=29324
Score = 102 bits (112), Expect = 1e-16
Identities = 268/409 (66%), Gaps = 0/409 (0%)
Strand=Plus/Plus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| || || |||||||| | | |||| || | | || ||| || |||||
Sbjct 1881 CCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATG 1940
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|||||||| || ||||| ||||| || || || || | | | || || |||||
Sbjct 1941 AAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCG 2000
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || |||||||| | | ||||| |||||| || || || || ||
Sbjct 2001 TGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATG 2060
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || || || || ||||| ||||| || | || | ||| ||||| || ||
Sbjct 2061 GCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTAC 2120
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| || || | ||||| || || || || || | ||| || || |||
Sbjct 2121 ACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCA 2180
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
| || || || || | | || || || || || |||| || || | ||
Sbjct 2181 GTGGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCA 2240
Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
|| |||| || |||||||||||||| || || || ||| ||||||
Sbjct 2241 CAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGT 2289
>seq1977
Length=29324
Score = 102 bits (112), Expect = 1e-16
Identities = 268/409 (66%), Gaps = 0/409 (0%)
Strand=Plus/Plus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| || || |||||||| | | |||| || | | || ||| || |||||
Sbjct 1881 CCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATG 1940
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|||||||| || ||||| ||||| || || || || | | | || || |||||
Sbjct 1941 AAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCG 2000
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || |||||||| | | ||||| |||||| || || || || ||
Sbjct 2001 TGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATG 2060
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | | || || || || ||||| ||||| || | || | ||| ||||| || ||
Sbjct 2061 GCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTAC 2120
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| || || | ||||| || || || || || | ||| || || |||
Sbjct 2121 ACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCA 2180
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
| || || || || | | || || || || || |||| || || | ||
Sbjct 2181 GTGGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCA 2240
Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
|| |||| || |||||||||||||| || || || ||| ||||||
Sbjct 2241 CAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGT 2289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694642220235040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |