Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq337 111 2e-19 >seq337 Length=168310 Score = 111 bits (122), Expect = 2e-19 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || || ||||| ||||| || ||||| ||||||||||| | ||||| || | | ||| Sbjct 158219 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGC 158278 Query 50692 ATGAACGCAGAC-ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50750 |||||||| ||| | |||||| ||||||| ||||| ||||| ||| | || || || Sbjct 158279 ATGAACGC-GACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGC 158337 Query 50751 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809 |||||| |||| ||| ||||| || | |||||||| || ||| | ||||| | Sbjct 158338 GCTGGG-CAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCT 158396 Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 || | | ||||| || ||||| ||||| | || || || || ||| Sbjct 158397 CGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTAC 158443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506991546325920