Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1393 95.1 8e-15 >seq1393 Length=54601 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 |||||||||||| || ||| |||||| | | || |||| |||||| || ||||| Sbjct 42542 CAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAA 42483 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 | || ||||||||| ||||| || || |||||||| || || || | |||| | ||| Sbjct 42482 GTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCC 42423 Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916 | || | || || | || || || | ||||||||||| || || |||||| Sbjct 42422 GACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGA 42363 Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 ||| || || |||| ||| ||| |||||||| || || || ||||||| Sbjct 42362 GAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGC 42306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340122651590238