Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 95.1 8e-15
>seq1393
Length=54601
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
|||||||||||| || ||| |||||| | | || |||| |||||| || |||||
Sbjct 42542 CAGCTGATCCACACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAA 42483
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
| || ||||||||| ||||| || || |||||||| || || || | |||| | |||
Sbjct 42482 GTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCC 42423
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
| || | || || | || || || | ||||||||||| || || ||||||
Sbjct 42422 GACACTGTCGAGGAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGA 42363
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973
||| || || |||| ||| ||| |||||||| || || || |||||||
Sbjct 42362 GAGAGGCTTCGATGATGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGC 42306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340122651590238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |