Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 345 1e-89 >seq1 Length=193982 Score = 345 bits (382), Expect = 1e-89 Identities = 997/1512 (66%), Gaps = 38/1512 (3%) Strand=Plus/Minus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||||||||| |||| || || ||| || |||||||||| || | | ||||||| Sbjct 93248 TGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAGG 93189 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| ||| |||||||||| ||||| || |||| ||||| | || ||||||| | Sbjct 93188 AGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACCG 93129 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | || || || ||| | | || || || | ||||| || | ||| |||||| ||| Sbjct 93128 CCGGTGGTATCGGTCTGAACGTTC-ACCGCATCCGTGCCACTGG-CAGCTACATTGCCGG 93071 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || | || || || | || ||||| ||||||| |||| ||||| | Sbjct 93070 TACTAACGGCACCAGCAACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCCG 93011 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||||||||| |||||| || || || || || || |||||||| Sbjct 93010 CTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGTG 92951 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||||| ||| | || ||||| || ||||| || ||| ||||||||||| | || Sbjct 92950 GCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTCG 92891 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || ||||| || ||||| || || ||| || | || | || |||||||| || ||| | Sbjct 92890 CGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAG-C 92832 Query 363987 AGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || | | ||| | ||| | ||||| |||| || || |||||| |||| || | | Sbjct 92831 AGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTATG 92772 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 |||| || | | || || ||||| ||||||| |||||| | ||| |||| Sbjct 92771 GTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGAGACTG 92712 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | | || |||||||| |||| || ||| | || | ||| | || || || | |||| Sbjct 92711 TCCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTAACCCCT 92652 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 ||||||||||| || |||||||||||| ||||||| || ||||||| || |||| Sbjct 92651 TCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATTC 92592 Query 364226 AGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | || | ||||| || ||| || | || ||||||||||| || || || || Sbjct 92591 -GTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACCGCTCCTGATGAAGTCGCTGTG 92533 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTT------TGTAAAAGATGGTACTTTTGAC 364338 || ||| | ||||| | ||||| || | || ||| | || ||| | ||| Sbjct 92532 TGCAACTTAGCGTCTCTGGCGCTACCCACCTTCGTCGATGTCGAGGAAGGTGTCTACGAC 92473 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTG----CAATCTCGACAAGGTTAT 364394 | || | ||| | || || || ||| | | |||| ||||| ||||| | || Sbjct 92472 TTCAAGAAGCTTCACGAGGTTAC---TCA-GGTGCTTGTCAAGAATCTGAACAAGATCAT 92417 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || | || ||| |||| |||||| | || |||||||| || || || Sbjct 92416 TGACATTAACCACTACCCAGTTCCAGAAGCCAGGAAGAGCAACATGCGTCACCGTCCTAT 92357 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 | | ||||||| | || || ||||||| ||| | ||||| ||| | || ||| Sbjct 92356 CGCTGTTGGTGTCAACGGTCTTGCTGACGCTTTCCT--TGCTCTTCGTATGCCGTTCGAT 92299 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || ||||| || || || | | ||||| || || || || || || | Sbjct 92298 TCTCCTGAGGCCAAGCAGCTGAACATTCAAATCTTCGAGACTATCTACCACGCTGCTCTC 92239 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 ||||| ||| ||| | || || | | || ||| || | |||| |||| Sbjct 92238 ACTGCCTCGGTTGAGCTCGCCAAGAGGGACGGCCCTTACGAAACGTTCCAGGGCAGCCCT 92179 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 || ||||||| | || | ||| | |||||| || || | | || ||| || Sbjct 92178 GCGTCCCAGGGAATTCTGCAATATGACATGTGGAATAAGACCCCCACCGACCTCTGGGAC 92119 Query 364693 TGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTA 364747 ||||| | ||| | | || | || |||| ||||| ||||||||| |||||| Sbjct 92118 TGGGACA-GCTTGAAG-GCCGAGATTGCCCAGCACGGTACCCGCAACTCCTTGCTCGTT- 92062 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || || |||||||| || || || ||||| ||||| ||| ||||| ||||| | Sbjct 92061 --GCTCCAATGCCCACTGCCTCGACCAGCCAGATTCTCGGCTTCAATGAGTGTTTCGAGC 92004 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | ||| || | || || ||||| || || |||| ||||| | ||| || || Sbjct 92003 CTTATACCTCAAACATCTACTCTCGCCGTGTCCTCGCCGGTGAATTCCAGGTTGTCAACC 91944 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACTAT 364926 || || | ||||| || |||| ||| |||||| ||| ||| ||||||||| Sbjct 91943 CGTGGCTCCTGAAGGACCTCGTTGACCTCGGACTGTGGTCTGATCAG-ATGAAGAACCGC 91885 Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCT 364986 ||||| ||| | || || ||| | ||| | || || | ||||| || | ||| | Sbjct 91884 ATCATTGCCTCCAACGGCTCTATTCAGCAGATCCCCAACATCCCAGATGACATCAAGGCG 91825 Query 364987 ATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGC 365046 | ||||| ||||| ||||| ||||| ||| || || || | ||||| ||||| || Sbjct 91824 CTCTACAAGACCGTCTGGGAGCTTTCCCAGCGCACCATCGTTCAGATGGCCGCCGACCGT 91765 Query 365047 GGTGCTTTTATC 365058 ||||| || ||| Sbjct 91764 GGTGCGTTCATC 91753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303293382619892