Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq337 268 2e-66
seq1 210 4e-49
seq3493 86.0 1e-11
>seq337
Length=168310
Score = 268 bits (296), Expect = 2e-66
Identities = 599/901 (66%), Gaps = 75/901 (8%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || || |||||| || ||||||||||| || |||||||
Sbjct 157557 ATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTTTCCAAGGAT 157616
Query 42369 ACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | | || || |||| || ||| || || | ||
Sbjct 157617 CTTCACGACTGGAACAAGCGCCTCAACGATGACGAGCGCTTCTTCATCTCCCACGTCCTC 157676
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|| ||||||||||| ||||||||||| || || |||||||| | | | ||||
Sbjct 157677 GCTTTCTTCGCCGCGTCTGACGGCATCGTGAACGAGAACCTCGTCGAACGCTTCAGCTCC 157736
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| | ||||| |||||||||||||| |||||||| || |||||| |
Sbjct 157737 GAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATC 157796
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
|| |||||| ||| | || || |||| |||||| || ||| |||| |||
Sbjct 157797 CATTCTGAGACCTACTCGCTTCTCATCGACACATACATCAGCGAGCCCAGGCAGCGCAAC 157856
Query 42606 GGGCTGTTCAAGGCCATGGAGA--------------------CGATG------------- 42632
|| ||||| ||||| || | |||||
Sbjct 157857 TATCTTTTCAACGCCATTGATAACAGTAAGCCCAATCCGCCTCGATGATGCAAAGCTTGG 157916
Query 42633 --------------------CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGA 42672
|| ||||||||||||||||| |||||||| || ||||
Sbjct 157917 ATCGCTAAAGTACTATAGTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGA 157976
Query 42673 TCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731
|| | | | || | | || |||| | | || | || || | |||||||||||
Sbjct 157977 TCT-GCGACAAGAACTCGACCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGT 158035
Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCC 42790
||||||||| ||| | ||||||||||| |||||||||||| || || || |||||
Sbjct 158036 ATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTC-ATGCC 158094
Query 42791 CGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGC 42850
|| | || ||||| || || |||||| | || ||||| |||||| ||||| ||
Sbjct 158095 TGGTTTGACTTTCTCCAATGAGCTCATCTCTCGCGATGAGGGCATGCATACCGACTTCGC 158154
Query 42851 CTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG----GG 42906
|||||| ||||||||| ||| ||| | |||||| || || |||| |
Sbjct 158155 CTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCC----AGCCCCGAATCCGTTGAGA 158207
Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966
|||||||| ||||| || |||||||||||||||||||||||| | | || |||||
Sbjct 158208 AGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCG 158267
Query 42967 CCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025
| || | |||||||| | |||| ||||||||| |||||||| ||| ||| || ||||
Sbjct 158268 CTCTTCTTGGCATGAA-CGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGC 158326
Query 43026 CTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084
|| || ||| | | |||| || ||||||| || | |||||||||||| ||
Sbjct 158327 CTGCTGGTGGC-GCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCAT 158385
Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||||| | | |||||||| ||||| |||||||||||||| | ||||||||
Sbjct 158386 GGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCA 158445
Query 43145 G 43145
|
Sbjct 158446 G 158446
>seq1
Length=193982
Score = 210 bits (232), Expect = 4e-49
Identities = 486/727 (67%), Gaps = 4/727 (1%)
Strand=Plus/Plus
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
|||||| || || || || || | |||||||| ||| || ||| ||| |||||
Sbjct 92527 GTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTTCGCAGCACAGGTTGGA 92586
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| |||||||| |||| || || ||| |||| ||||||| ||||||||| |
Sbjct 92587 GCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAA 92646
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAG 244871
||||||||| ||||| |||| |||||| |||||| ||| || |||||| | | ||
Sbjct 92647 CATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGC-GTACCAGAGCTTCTGAG 92705
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
| ||| ||| |||| | ||||| ||| || | ||| ||||||||||| |
Sbjct 92706 CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATT 92765
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
| || |||| ||| | || || |||||| ||||||||||| |||| ||
Sbjct 92766 CCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGC 92825
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || || | || ||||||||| ||||| |||||||| || | ||| ||||| |
Sbjct 92826 CGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCAC 92885
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
| | ||| || || |||||| | || || | |||| ||||| ||
Sbjct 92886 GAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAG 92945
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
| ||||| ||||| | ||||| |||| || ||||| |||||||| || |||||||| |
Sbjct 92946 CATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAA 93005
Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | | || | |||| | | || || |||| | | |||||| | ||||
Sbjct 93006 CGTAGCGGGC-AGTGTTGTTGTACACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCG 93064
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
|| || || |||||| ||| || | | || | | | | || || | ||
Sbjct 93065 TTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGAACGTTCAGACCGATACCA 93124
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|||||| ||||||||| | ||| ||| |||| | |||||| || ||||| |||||
Sbjct 93125 CCGGCGGTCTTGGAGATCATGGCACAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTA 93184
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
||| |||||||| || || ||||| || | || ||| |||||||| | | | |||
Sbjct 93185 TCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTG 93244
Query 245411 AACAGAG 245417
|||||||
Sbjct 93245 AACAGAG 93251
>seq3493
Length=194596
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002
||| | ||||| ||| | || || |||||||| |||||||||||| |||| || | |
Sbjct 56609 ATGCGCTTCCCAGACCGCACGACGCCGATCGGGCAGATGATCAACGCGTATCTCACCGGC 56550
Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062
|||||| | || || |||||| | ||||| || ||||| || ||||| ||||||||
Sbjct 56549 GCGAGCGAGCAAGAGGACCACGTCATTCACCTGCTCTTCTCTGCAAACCGCTGGGAAGCT 56490
Query 243063 GC 243064
||
Sbjct 56489 GC 56488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944296633910560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |