Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
>seq1
Length=193982
Score = 138 bits (152), Expect = 1e-27
Identities = 865/1378 (63%), Gaps = 26/1378 (2%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 91608 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 91667
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| ||||||| || | |||||||||| | |||| | || || | ||||
Sbjct 91668 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 91727
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| || | || |||||||||||||| ||||| || || ||||| | || |
Sbjct 91728 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 91787
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
| | | || | | ||||| || || ||||||| ||| || ||||||||||
Sbjct 91788 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 91844
Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861
| | ||| | || || ||||| | | ||| | | |||||| | | |
Sbjct 91845 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 91904
Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 91905 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 91964
Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980
| |||||| || | ||| ||||| || | || || ||||| || |||||||||
Sbjct 91965 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAG 92023
Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040
|| | || ||| ||| ||||| |||||||| || || | ||| | | ||| ||| |
Sbjct 92024 CCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTA 92083
Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 114100
|| | | ||| |||| | | ||||||||| || | | | |
Sbjct 92084 CCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTTA 92143
Query 114101 TGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT 114160
| |||||| ||| | || || || || ||||| || || |||| || || |||||
Sbjct 92144 TTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAA 92203
Query 114161 GGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217
||||| || || || | || ||| || ||| || ||||| || || |||
Sbjct 92204 GGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGTC 92260
Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277
|| || || || |||| ||||||||| ||||| |||| | || |
Sbjct 92261 TCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCA 92320
Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337
| || | || || ||||| | |||||| | | || || || || | ||| || |
Sbjct 92321 AGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTC 92380
Query 114338 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396
|| | || ||| | | || || || | || || | | | || ||||| |||
Sbjct 92381 TTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGAC 92439
Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCAT 114452
| |||| || | || |||||||| | | | || | | || | ||| |||
Sbjct 92440 AAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACAT 92495
Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512
||| | | || || || | ||||| | || ||||||| | ||||| | | |
Sbjct 92496 CGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGG 92555
Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572
||||||| | ||||| |||| || || || ||||||||| | |||||| || |
Sbjct 92556 TGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGT 92615
Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
| ||| ||| || |||||||| | |||| | || | || || || ||||
Sbjct 92616 TGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGG 92675
Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691
|| ||| || || | ||||| | || | | || ||||| || | || ||||||
Sbjct 92676 CCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCC 92734
Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751
| ||| |||| ||||||||| || || || ||||| | | || | || || ||
Sbjct 92735 TTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGG 92794
Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811
|| | ||||| | ||| | ||| || || |||||||||||||||||||||
Sbjct 92795 CACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGA 92854
Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871
|| || ||||||||||| |||| || || ||| |||| | || || | || || ||
Sbjct 92855 TCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTC 92914
Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929
||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 92915 TTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 92972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597326674286480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |