Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 >seq1 Length=193982 Score = 138 bits (152), Expect = 1e-27 Identities = 865/1378 (63%), Gaps = 26/1378 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| ||||| || ||||| | |||||||||||||| || |||||||| | Sbjct 91608 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 91667 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | ||||||| || | |||||||||| | |||| | || || | |||| Sbjct 91668 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 91727 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || || | || |||||||||||||| ||||| || || ||||| | || | Sbjct 91728 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 91787 Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801 | | | || | | ||||| || || ||||||| ||| || |||||||||| Sbjct 91788 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 91844 Query 113802 TATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 | | ||| | || || ||||| | | ||| | | |||||| | | | Sbjct 91845 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 91904 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921 |||| || || | | ||| |||| || ||| | |||||||| || |||| Sbjct 91905 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 91964 Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 | |||||| || | ||| ||||| || | || || ||||| || ||||||||| Sbjct 91965 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGAAG 92023 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 || | || ||| ||| ||||| |||||||| || || | ||| | | ||| ||| | Sbjct 92024 CCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGTA 92083 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC 114100 || | | ||| |||| | | ||||||||| || | | | | Sbjct 92084 CCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCTTA 92143 Query 114101 TGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTAT 114160 | |||||| ||| | || || || || ||||| || || |||| || || ||||| Sbjct 92144 TTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGTAA 92203 Query 114161 GGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217 ||||| || || || | || ||| || ||| || ||||| || || ||| Sbjct 92204 GGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAGTC 92260 Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277 || || || || |||| ||||||||| ||||| |||| | || | Sbjct 92261 TCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAGCA 92320 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || | || || ||||| | |||||| | | || || || || | ||| || | Sbjct 92321 AGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGCTC 92380 Query 114338 TTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396 || | || ||| | | || || || | || || | | | || ||||| ||| Sbjct 92381 TTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTGAC 92439 Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTCAT 114452 | |||| || | || |||||||| | | | || | | || | ||| ||| Sbjct 92440 AAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGACAT 92495 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| | | || || || | ||||| | || ||||||| | ||||| | | | Sbjct 92496 CGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGG 92555 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||||||| | ||||| |||| || || || ||||||||| | |||||| || | Sbjct 92556 TGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGT 92615 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | ||| ||| || |||||||| | |||| | || | || || || |||| Sbjct 92616 TGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGG 92675 Query 114633 ACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691 || ||| || || | ||||| | || | | || ||||| || | || |||||| Sbjct 92676 CCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCC 92734 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | ||| |||| ||||||||| || || || ||||| | | || | || || || Sbjct 92735 TTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGG 92794 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 || | ||||| | ||| | ||| || || ||||||||||||||||||||| Sbjct 92795 CACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGA 92854 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871 || || ||||||||||| |||| || || ||| |||| | || || | || || || Sbjct 92855 TCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTC 92914 Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 ||| | || | |||| | || ||| || |||||||| || ||||| | |||| Sbjct 92915 TTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 92972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597326674286480