Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=193982 Score = 102 bits (112), Expect = 1e-16 Identities = 328/496 (66%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || ||| || |||||||| |||| | || | || |||||| | | || ||||||||| Sbjct 91597 CTGGTCGACAGTGAACTGGATGG-GAGCAGCAGC-GGCCTGGGTGCGGAGGTAGTACATG 91654 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 |||||||| ||||| || ||| || | |||||| || | | |||| || || Sbjct 91655 CCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTG 91714 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 ||||| |||||| || || || ||||| ||| |||||||| | | || || ||| Sbjct 91715 GGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCG 91774 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | ||||| ||| |||| |||||| || |||||| | | || || || | Sbjct 91775 GCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCT-TGAT 91833 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || | || | | | | | ||| || ||||||||| ||| || | | || Sbjct 91834 GTCATCTGGGATGT-TGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCT 91892 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||| || ||||| | || | | | | || ||| || || ||||||| Sbjct 91893 TCATCTGATCAGACCACA-GTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACA 91951 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| || || | || | | | | ||| ||| | || ||||| Sbjct 91952 ACCTGGAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAA 92011 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| ||| ||||| |||||| ||| ||| |||||||| ||||| | ||||| | Sbjct 92012 CACTCATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAG 92071 Query 204314 GAGTTGCGCACACCGT 204329 |||||||| ||||| Sbjct 92072 GAGTTGCGGGTACCGT 92087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795119358379360