Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-30 >seq1 Length=193982 Score = 147 bits (162), Expect = 3e-30 Identities = 486/750 (65%), Gaps = 13/750 (2%) Strand=Plus/Plus Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 |||| || || | |||||| | |||||||||| || || ||||||| || | Sbjct 92505 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 92564 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 ||||| |||| |||||| || |||| || | ||||||||| || ||| Sbjct 92565 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 92624 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 |||||| ||||| || | |||| | ||| |||| ||||| ||| | || ||| | Sbjct 92625 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 92684 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTAC 110517 | || | ||| | | || | | | ||||||| || | | |||| |||| ||| ||| Sbjct 92685 TCGCGTACCAGAGCTTCTGAG-CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATAC 92743 Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577 | ||| | | |||| ||||||| || || || || | |||||| || || Sbjct 92744 TGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTA 92803 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || || | ||||| ||| | || || |||||| | ||||||||| || || |||||| Sbjct 92804 GGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATC 92863 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || ||||||||||||| ||| |||| || | || ||||| || || Sbjct 92864 CAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGG 92923 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------TGGAT 110751 || | |||| | || ||| | ||||| || ||||| |||| |||| || Sbjct 92924 TCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGG 92983 Query 110752 CCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATA 110811 | ||| || || |||||| ||| ||||| || ||| ||| | || | ||||||| Sbjct 92984 CGCTTGTTACCAC---CCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATA 93040 Query 110812 GGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATG 110871 || || | || | | || || ||||| ||| | | ||||||| ||| Sbjct 93041 GGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATG 93100 Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAG 110930 ||| | | || ||| |||||||| || ||| || ||||| ||| | || Sbjct 93101 CGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCT-TCAG 93159 Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990 || | || ||||| ||||| ||| |||| || | || || |||||||||| || Sbjct 93160 GGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAA 93219 Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020 |||||| || || || |||||||| || Sbjct 93220 CTGAGGCTTGGGAGTACCAGCATTGAACAG 93249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588949451906800